Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 AC104794.3-201ENST00000566840 1248 ntBASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 AC004840.1-201ENST00000636359 365 ntBASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 AL109936.8-201ENST00000641772 604 ntBASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 AL691432.1-201ENST00000596308 1422 ntBASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 BTBD7P1-201ENST00000447253 1453 ntBASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 AC004987.2-201ENST00000395959 1148 ntBASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 AC015922.1-201ENST00000421102 1152 ntBASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 SDHAP3-202ENST00000515467 728 ntBASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 AC027307.3-201ENST00000594262 1100 ntBASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.13□□□□□ -0.31
PCGF1Q9BSM1 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 AC007541.1-201ENST00000570282 1469 ntBASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms