Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 TMEM14DP-201ENST00000422205 345 ntBASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 AC093433.1-201ENST00000458048 571 ntBASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 AC134312.5-201ENST00000568031 1313 ntBASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDK5RAP1Q96SZ6 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDK5RAP1Q96SZ6 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDK5RAP1Q96SZ6 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CDK5RAP1Q96SZ6 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDK5RAP1Q96SZ6 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.08■□□□□ 0.17
CDK5RAP1Q96SZ6 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDK5RAP1Q96SZ6 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.08■□□□□ 0.17
CDK5RAP1Q96SZ6 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CDK5RAP1Q96SZ6 AC008741.2-201ENST00000612792 3115 ntBASIC16.08■□□□□ 0.17
CDK5RAP1Q96SZ6 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDK5RAP1Q96SZ6 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDK5RAP1Q96SZ6 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 AC114812.1-204ENST00000449669 728 ntBASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 AC018665.1-201ENST00000622927 1362 ntBASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDK5RAP1Q96SZ6 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDK5RAP1Q96SZ6 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDK5RAP1Q96SZ6 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDK5RAP1Q96SZ6 PRAL-201ENST00000624952 3286 ntBASIC16.07■□□□□ 0.16
CDK5RAP1Q96SZ6 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
CDK5RAP1Q96SZ6 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CDK5RAP1Q96SZ6 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDK5RAP1Q96SZ6 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDK5RAP1Q96SZ6 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDK5RAP1Q96SZ6 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.07■□□□□ 0.16
CDK5RAP1Q96SZ6 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms