Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GAFA1Q96PS6 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GAFA1Q96PS6 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
GAFA1Q96PS6 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GAFA1Q96PS6 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
GAFA1Q96PS6 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
GAFA1Q96PS6 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GAFA1Q96PS6 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
GAFA1Q96PS6 GHSR-202ENST00000427970 912 ntBASIC12.9□□□□□ -0.34
GAFA1Q96PS6 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GAFA1Q96PS6 CRB3P1-201ENST00000449338 276 ntBASIC12.9□□□□□ -0.34
GAFA1Q96PS6 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC12.9□□□□□ -0.34
GAFA1Q96PS6 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC12.9□□□□□ -0.34
GAFA1Q96PS6 GAPDHP40-201ENST00000505218 1006 ntBASIC12.9□□□□□ -0.34
GAFA1Q96PS6 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC12.9□□□□□ -0.34
GAFA1Q96PS6 AC026410.3-201ENST00000514280 936 ntBASIC12.9□□□□□ -0.34
GAFA1Q96PS6 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.9□□□□□ -0.34
GAFA1Q96PS6 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.9□□□□□ -0.34
GAFA1Q96PS6 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC12.9□□□□□ -0.34
GAFA1Q96PS6 WASH4P-201ENST00000564273 1246 ntBASIC12.9□□□□□ -0.34
GAFA1Q96PS6 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.9□□□□□ -0.34
GAFA1Q96PS6 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.9□□□□□ -0.34
GAFA1Q96PS6 AC107373.2-201ENST00000607735 490 ntBASIC12.9□□□□□ -0.34
GAFA1Q96PS6 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.9□□□□□ -0.34
GAFA1Q96PS6 AL645728.2-202ENST00000641679 227 ntBASIC12.9□□□□□ -0.34
GAFA1Q96PS6 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
GAFA1Q96PS6 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
GAFA1Q96PS6 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
GAFA1Q96PS6 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GAFA1Q96PS6 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GAFA1Q96PS6 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GAFA1Q96PS6 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
GAFA1Q96PS6 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GAFA1Q96PS6 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
GAFA1Q96PS6 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
GAFA1Q96PS6 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
GAFA1Q96PS6 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
GAFA1Q96PS6 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
GAFA1Q96PS6 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
GAFA1Q96PS6 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
GAFA1Q96PS6 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
GAFA1Q96PS6 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.35
GAFA1Q96PS6 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
GAFA1Q96PS6 INTS4P2-202ENST00000614726 2019 ntBASIC12.89□□□□□ -0.35
GAFA1Q96PS6 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GAFA1Q96PS6 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
GAFA1Q96PS6 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
GAFA1Q96PS6 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
GAFA1Q96PS6 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
GAFA1Q96PS6 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
GAFA1Q96PS6 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
GAFA1Q96PS6 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GAFA1Q96PS6 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.89□□□□□ -0.35
GAFA1Q96PS6 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GAFA1Q96PS6 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
GAFA1Q96PS6 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
GAFA1Q96PS6 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GAFA1Q96PS6 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.89□□□□□ -0.35
GAFA1Q96PS6 AC006486.2-201ENST00000624246 2199 ntBASIC12.89□□□□□ -0.35
GAFA1Q96PS6 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GAFA1Q96PS6 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GAFA1Q96PS6 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GAFA1Q96PS6 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.89□□□□□ -0.35
GAFA1Q96PS6 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GAFA1Q96PS6 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.89□□□□□ -0.35
GAFA1Q96PS6 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.89□□□□□ -0.35
GAFA1Q96PS6 ELK1P1-201ENST00000485699 580 ntBASIC12.89□□□□□ -0.35
GAFA1Q96PS6 AC092552.1-201ENST00000547243 906 ntBASIC12.89□□□□□ -0.35
GAFA1Q96PS6 TP53TG3HP-202ENST00000569755 579 ntBASIC12.89□□□□□ -0.35
GAFA1Q96PS6 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.89□□□□□ -0.35
GAFA1Q96PS6 MIR3197-201ENST00000582241 73 ntBASIC12.89□□□□□ -0.35
GAFA1Q96PS6 TMEM261P1-201ENST00000604899 340 ntBASIC12.89□□□□□ -0.35
GAFA1Q96PS6 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.89□□□□□ -0.35
GAFA1Q96PS6 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
GAFA1Q96PS6 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.89□□□□□ -0.35
GAFA1Q96PS6 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
GAFA1Q96PS6 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GAFA1Q96PS6 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.89□□□□□ -0.35
GAFA1Q96PS6 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GAFA1Q96PS6 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
GAFA1Q96PS6 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GAFA1Q96PS6 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
GAFA1Q96PS6 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GAFA1Q96PS6 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
GAFA1Q96PS6 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GAFA1Q96PS6 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
GAFA1Q96PS6 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GAFA1Q96PS6 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
GAFA1Q96PS6 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms