Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT43Q96FT9 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT43Q96FT9 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT43Q96FT9 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT43Q96FT9 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT43Q96FT9 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT43Q96FT9 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.09■□□□□ 0.17
IFT43Q96FT9 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
IFT43Q96FT9 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
IFT43Q96FT9 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.09■□□□□ 0.17
IFT43Q96FT9 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT43Q96FT9 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT43Q96FT9 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
IFT43Q96FT9 AZGP1P1-201ENST00000411909 902 ntBASIC16.09■□□□□ 0.17
IFT43Q96FT9 RPL37AP1-201ENST00000412502 279 ntBASIC16.09■□□□□ 0.17
IFT43Q96FT9 SERBP1P3-201ENST00000459980 809 ntBASIC16.09■□□□□ 0.17
IFT43Q96FT9 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.09■□□□□ 0.17
IFT43Q96FT9 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT43Q96FT9 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.09■□□□□ 0.17
IFT43Q96FT9 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.09■□□□□ 0.17
IFT43Q96FT9 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.09■□□□□ 0.17
IFT43Q96FT9 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT43Q96FT9 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.09■□□□□ 0.17
IFT43Q96FT9 AC004233.3-201ENST00000607794 1269 ntBASIC16.09■□□□□ 0.17
IFT43Q96FT9 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT43Q96FT9 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
IFT43Q96FT9 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT43Q96FT9 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
IFT43Q96FT9 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
IFT43Q96FT9 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.09■□□□□ 0.17
IFT43Q96FT9 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT43Q96FT9 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT43Q96FT9 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
IFT43Q96FT9 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT43Q96FT9 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
IFT43Q96FT9 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
IFT43Q96FT9 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
IFT43Q96FT9 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
IFT43Q96FT9 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.08■□□□□ 0.17
IFT43Q96FT9 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
IFT43Q96FT9 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.08■□□□□ 0.17
IFT43Q96FT9 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
IFT43Q96FT9 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
IFT43Q96FT9 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
IFT43Q96FT9 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
IFT43Q96FT9 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
IFT43Q96FT9 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
IFT43Q96FT9 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
IFT43Q96FT9 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
IFT43Q96FT9 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IFT43Q96FT9 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IFT43Q96FT9 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
IFT43Q96FT9 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.08■□□□□ 0.16
IFT43Q96FT9 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IFT43Q96FT9 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.08■□□□□ 0.16
IFT43Q96FT9 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.08■□□□□ 0.16
IFT43Q96FT9 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.08■□□□□ 0.16
IFT43Q96FT9 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
IFT43Q96FT9 AC244107.1-201ENST00000442033 332 ntBASIC16.08■□□□□ 0.16
IFT43Q96FT9 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
IFT43Q96FT9 AL844908.2-201ENST00000609461 460 ntBASIC16.08■□□□□ 0.16
IFT43Q96FT9 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.08■□□□□ 0.16
IFT43Q96FT9 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.08■□□□□ 0.16
IFT43Q96FT9 AL662799.1-202ENST00000614205 422 ntBASIC16.08■□□□□ 0.16
IFT43Q96FT9 MIR6069-201ENST00000620069 79 ntBASIC16.08■□□□□ 0.16
IFT43Q96FT9 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
IFT43Q96FT9 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.08■□□□□ 0.16
IFT43Q96FT9 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IFT43Q96FT9 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.08■□□□□ 0.16
IFT43Q96FT9 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
IFT43Q96FT9 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.08■□□□□ 0.16
IFT43Q96FT9 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.08■□□□□ 0.16
IFT43Q96FT9 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
IFT43Q96FT9 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.08■□□□□ 0.16
IFT43Q96FT9 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
IFT43Q96FT9 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
IFT43Q96FT9 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IFT43Q96FT9 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.08■□□□□ 0.16
IFT43Q96FT9 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
IFT43Q96FT9 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
IFT43Q96FT9 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
IFT43Q96FT9 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
IFT43Q96FT9 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.08■□□□□ 0.16
IFT43Q96FT9 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IFT43Q96FT9 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.07■□□□□ 0.16
IFT43Q96FT9 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IFT43Q96FT9 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
IFT43Q96FT9 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.07■□□□□ 0.16
IFT43Q96FT9 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
IFT43Q96FT9 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IFT43Q96FT9 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
IFT43Q96FT9 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
IFT43Q96FT9 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
IFT43Q96FT9 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
IFT43Q96FT9 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IFT43Q96FT9 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IFT43Q96FT9 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IFT43Q96FT9 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
IFT43Q96FT9 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
IFT43Q96FT9 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms