Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.29■□□□□ 0.04
CLDN23Q96B33 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CLDN23Q96B33 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN23Q96B33 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CLDN23Q96B33 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN23Q96B33 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CLDN23Q96B33 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN23Q96B33 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN23Q96B33 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN23Q96B33 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN23Q96B33 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN23Q96B33 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN23Q96B33 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CLDN23Q96B33 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.28■□□□□ 0.04
CLDN23Q96B33 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.28■□□□□ 0.04
CLDN23Q96B33 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN23Q96B33 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CLDN23Q96B33 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN23Q96B33 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.28■□□□□ 0.04
CLDN23Q96B33 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN23Q96B33 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN23Q96B33 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN23Q96B33 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CLDN23Q96B33 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.28■□□□□ 0.04
CLDN23Q96B33 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC15.28■□□□□ 0.04
CLDN23Q96B33 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CLDN23Q96B33 RPSAP31-201ENST00000416648 895 ntBASIC15.28■□□□□ 0.04
CLDN23Q96B33 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC15.28■□□□□ 0.04
CLDN23Q96B33 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN23Q96B33 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CLDN23Q96B33 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
CLDN23Q96B33 IGLV3-15-201ENST00000518356 244 ntBASIC15.28■□□□□ 0.04
CLDN23Q96B33 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC15.28■□□□□ 0.04
CLDN23Q96B33 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN23Q96B33 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN23Q96B33 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN23Q96B33 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
CLDN23Q96B33 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
CLDN23Q96B33 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN23Q96B33 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN23Q96B33 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN23Q96B33 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN23Q96B33 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.28■□□□□ 0.04
CLDN23Q96B33 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN23Q96B33 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN23Q96B33 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN23Q96B33 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN23Q96B33 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN23Q96B33 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN23Q96B33 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN23Q96B33 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN23Q96B33 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN23Q96B33 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.27■□□□□ 0.04
CLDN23Q96B33 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.27■□□□□ 0.04
CLDN23Q96B33 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CLDN23Q96B33 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.27■□□□□ 0.04
CLDN23Q96B33 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.27■□□□□ 0.04
CLDN23Q96B33 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
CLDN23Q96B33 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN23Q96B33 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CLDN23Q96B33 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN23Q96B33 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN23Q96B33 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN23Q96B33 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.27■□□□□ 0.04
CLDN23Q96B33 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN23Q96B33 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN23Q96B33 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
CLDN23Q96B33 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CLDN23Q96B33 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN23Q96B33 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CLDN23Q96B33 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CLDN23Q96B33 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN23Q96B33 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
CLDN23Q96B33 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN23Q96B33 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.27■□□□□ 0.04
CLDN23Q96B33 HNRNPA1P41-201ENST00000397777 928 ntBASIC15.27■□□□□ 0.04
CLDN23Q96B33 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN23Q96B33 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC15.27■□□□□ 0.04
CLDN23Q96B33 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.27■□□□□ 0.04
CLDN23Q96B33 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.27■□□□□ 0.04
CLDN23Q96B33 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC15.27■□□□□ 0.04
CLDN23Q96B33 NEU3-205ENST00000531619 582 ntTSL 5 BASIC15.27■□□□□ 0.04
CLDN23Q96B33 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN23Q96B33 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
CLDN23Q96B33 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC15.27■□□□□ 0.04
CLDN23Q96B33 DUX4L46-201ENST00000566845 751 ntBASIC15.27■□□□□ 0.04
CLDN23Q96B33 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.27■□□□□ 0.04
CLDN23Q96B33 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC15.27■□□□□ 0.04
CLDN23Q96B33 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN23Q96B33 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.27■□□□□ 0.04
CLDN23Q96B33 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.27■□□□□ 0.04
CLDN23Q96B33 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.27■□□□□ 0.04
CLDN23Q96B33 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC15.27■□□□□ 0.04
CLDN23Q96B33 CDK7-214ENST00000626796 358 ntTSL 5 BASIC15.27■□□□□ 0.04
CLDN23Q96B33 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC15.27■□□□□ 0.04
CLDN23Q96B33 NAP1L6-202ENST00000641404 1222 ntBASIC15.27■□□□□ 0.04
CLDN23Q96B33 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.27■□□□□ 0.03
CLDN23Q96B33 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN23Q96B33 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN23Q96B33 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms