Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SIMC1Q8NDZ2 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SIMC1Q8NDZ2 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 AL122018.1-201ENST00000446607 2310 ntBASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 UGT1A2P-201ENST00000454886 866 ntBASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 SERBP1P3-201ENST00000459980 809 ntBASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 AC093214.1-201ENST00000511688 1107 ntBASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 AC008738.7-201ENST00000609744 511 ntBASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 AC004790.1-201ENST00000612686 536 ntBASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 AC004840.1-201ENST00000636359 365 ntBASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.71□□□□□ -0.05
SIMC1Q8NDZ2 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SIMC1Q8NDZ2 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
SIMC1Q8NDZ2 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
SIMC1Q8NDZ2 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SIMC1Q8NDZ2 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SIMC1Q8NDZ2 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.71□□□□□ -0.06
SIMC1Q8NDZ2 NORAD-201ENST00000565493 5339 ntBASIC14.71□□□□□ -0.06
SIMC1Q8NDZ2 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
SIMC1Q8NDZ2 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.71□□□□□ -0.06
SIMC1Q8NDZ2 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.71□□□□□ -0.06
SIMC1Q8NDZ2 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SIMC1Q8NDZ2 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
SIMC1Q8NDZ2 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SIMC1Q8NDZ2 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms