Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
XRN1Q8IZH2 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
XRN1Q8IZH2 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC20.96■□□□□ 0.95
XRN1Q8IZH2 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
XRN1Q8IZH2 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
XRN1Q8IZH2 AP000356.3-201ENST00000382243 753 ntBASIC20.96■□□□□ 0.95
XRN1Q8IZH2 MIR557-201ENST00000385239 98 ntBASIC20.96■□□□□ 0.95
XRN1Q8IZH2 AL512430.1-201ENST00000392575 860 ntBASIC20.96■□□□□ 0.95
XRN1Q8IZH2 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC20.96■□□□□ 0.95
XRN1Q8IZH2 TPM1-223ENST00000560445 485 ntTSL 3 BASIC20.96■□□□□ 0.95
XRN1Q8IZH2 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC20.96■□□□□ 0.95
XRN1Q8IZH2 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
XRN1Q8IZH2 FRMPD2B-201ENST00000431305 1347 ntBASIC20.96■□□□□ 0.95
XRN1Q8IZH2 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
XRN1Q8IZH2 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC20.96■□□□□ 0.95
XRN1Q8IZH2 CA12-203ENST00000422263 2556 ntTSL 2 BASIC20.96■□□□□ 0.95
XRN1Q8IZH2 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
XRN1Q8IZH2 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
XRN1Q8IZH2 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
XRN1Q8IZH2 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
XRN1Q8IZH2 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC20.95■□□□□ 0.95
XRN1Q8IZH2 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC20.95■□□□□ 0.94
XRN1Q8IZH2 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
XRN1Q8IZH2 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
XRN1Q8IZH2 NCR3-202ENST00000376071 541 ntTSL 5 BASIC20.95■□□□□ 0.94
XRN1Q8IZH2 RPL8P2-201ENST00000430538 502 ntBASIC20.95■□□□□ 0.94
XRN1Q8IZH2 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC20.95■□□□□ 0.94
XRN1Q8IZH2 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC20.95■□□□□ 0.94
XRN1Q8IZH2 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
XRN1Q8IZH2 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC20.95■□□□□ 0.94
XRN1Q8IZH2 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
XRN1Q8IZH2 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
XRN1Q8IZH2 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
XRN1Q8IZH2 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
XRN1Q8IZH2 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
XRN1Q8IZH2 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
XRN1Q8IZH2 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC20.95■□□□□ 0.94
XRN1Q8IZH2 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC20.95■□□□□ 0.94
XRN1Q8IZH2 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC20.95■□□□□ 0.94
XRN1Q8IZH2 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
XRN1Q8IZH2 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
XRN1Q8IZH2 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
XRN1Q8IZH2 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
XRN1Q8IZH2 AC003102.2-201ENST00000589195 1469 ntBASIC20.95■□□□□ 0.94
XRN1Q8IZH2 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
XRN1Q8IZH2 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
XRN1Q8IZH2 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
XRN1Q8IZH2 AC092364.2-201ENST00000596710 2692 ntBASIC20.95■□□□□ 0.94
XRN1Q8IZH2 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
XRN1Q8IZH2 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
XRN1Q8IZH2 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
XRN1Q8IZH2 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
XRN1Q8IZH2 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
XRN1Q8IZH2 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
XRN1Q8IZH2 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
XRN1Q8IZH2 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
XRN1Q8IZH2 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
XRN1Q8IZH2 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
XRN1Q8IZH2 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC20.94■□□□□ 0.94
XRN1Q8IZH2 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
XRN1Q8IZH2 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
XRN1Q8IZH2 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
XRN1Q8IZH2 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC20.94■□□□□ 0.94
XRN1Q8IZH2 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
XRN1Q8IZH2 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
XRN1Q8IZH2 AC018629.1-201ENST00000623381 1736 ntBASIC20.94■□□□□ 0.94
XRN1Q8IZH2 GCK-209ENST00000616242 2260 ntTSL 5 BASIC20.94■□□□□ 0.94
XRN1Q8IZH2 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
XRN1Q8IZH2 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC20.94■□□□□ 0.94
XRN1Q8IZH2 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC20.94■□□□□ 0.94
XRN1Q8IZH2 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
XRN1Q8IZH2 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC20.94■□□□□ 0.94
XRN1Q8IZH2 AC008825.2-201ENST00000603374 718 ntBASIC20.94■□□□□ 0.94
XRN1Q8IZH2 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC20.94■□□□□ 0.94
XRN1Q8IZH2 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
XRN1Q8IZH2 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC20.94■□□□□ 0.94
XRN1Q8IZH2 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
XRN1Q8IZH2 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
XRN1Q8IZH2 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
XRN1Q8IZH2 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
XRN1Q8IZH2 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC20.93■□□□□ 0.94
XRN1Q8IZH2 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
XRN1Q8IZH2 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.93■□□□□ 0.94
XRN1Q8IZH2 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
XRN1Q8IZH2 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC20.93■□□□□ 0.94
XRN1Q8IZH2 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
XRN1Q8IZH2 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
XRN1Q8IZH2 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
XRN1Q8IZH2 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC20.93■□□□□ 0.94
XRN1Q8IZH2 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC20.93■□□□□ 0.94
XRN1Q8IZH2 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
XRN1Q8IZH2 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
XRN1Q8IZH2 AC005357.2-202ENST00000590507 1060 ntBASIC20.93■□□□□ 0.94
XRN1Q8IZH2 AC025262.2-201ENST00000623975 1056 ntBASIC20.93■□□□□ 0.94
XRN1Q8IZH2 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
XRN1Q8IZH2 AC136759.1-202ENST00000530858 2194 ntBASIC20.93■□□□□ 0.94
XRN1Q8IZH2 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC20.93■□□□□ 0.94
XRN1Q8IZH2 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC20.93■□□□□ 0.94
XRN1Q8IZH2 CYP51A1P3-201ENST00000400072 1428 ntBASIC20.93■□□□□ 0.94
XRN1Q8IZH2 KRT8P31-201ENST00000504812 1408 ntBASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms