Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 AC140658.5-201ENST00000438532 169 ntBASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 VN2R19P-201ENST00000442399 1052 ntBASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 AC108751.1-201ENST00000490852 363 ntBASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 AC007064.4-201ENST00000637740 555 ntBASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.61■□□□□ 0.09
TRIM42Q8IWZ5 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 MIR940-201ENST00000401276 94 ntBASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 AC061975.2-201ENST00000581722 295 ntBASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 AL161645.1-201ENST00000622716 1255 ntBASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 AC107918.4-201ENST00000641966 3141 ntBASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM42Q8IWZ5 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM42Q8IWZ5 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.59■□□□□ 0.09
TRIM42Q8IWZ5 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.59■□□□□ 0.09
TRIM42Q8IWZ5 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.59■□□□□ 0.09
TRIM42Q8IWZ5 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM42Q8IWZ5 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms