Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 IPPK-202ENST00000375522 882 ntTSL 3 BASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 MRPL3P1-201ENST00000400109 1033 ntBASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 KRT18P56-201ENST00000507275 550 ntBASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 AL135744.1-201ENST00000565098 629 ntBASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 AP001005.1-201ENST00000571755 1248 ntBASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 AC041040.2-201ENST00000622926 2899 ntBASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRTM1Q86UE6 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 MIR346-201ENST00000362234 95 ntBASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 HLA-H-201ENST00000383620 1096 ntBASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 GHSR-202ENST00000427970 912 ntBASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 AC034105.1-201ENST00000563488 319 ntBASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 AP000845.1-201ENST00000581677 2131 ntBASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 AC026979.3-201ENST00000607315 403 ntBASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 AL513190.1-201ENST00000621254 727 ntBASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
LRRTM1Q86UE6 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms