Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 DANCR-204ENST00000444958 709 ntTSL 3 BASIC12.13□□□□□ -0.47
KCNIP4Q6PIL6 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
KCNIP4Q6PIL6 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
KCNIP4Q6PIL6 RBM42-202ENST00000586618 771 ntTSL 3 BASIC12.13□□□□□ -0.47
KCNIP4Q6PIL6 AC083849.1-201ENST00000615227 514 ntBASIC12.13□□□□□ -0.47
KCNIP4Q6PIL6 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
KCNIP4Q6PIL6 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC12.13□□□□□ -0.47
KCNIP4Q6PIL6 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
KCNIP4Q6PIL6 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
KCNIP4Q6PIL6 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
KCNIP4Q6PIL6 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
KCNIP4Q6PIL6 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
KCNIP4Q6PIL6 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
KCNIP4Q6PIL6 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
KCNIP4Q6PIL6 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.13□□□□□ -0.47
KCNIP4Q6PIL6 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC12.13□□□□□ -0.47
KCNIP4Q6PIL6 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
KCNIP4Q6PIL6 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
KCNIP4Q6PIL6 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
KCNIP4Q6PIL6 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
KCNIP4Q6PIL6 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC12.13□□□□□ -0.47
KCNIP4Q6PIL6 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
KCNIP4Q6PIL6 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 CR383656.2-201ENST00000548656 2254 ntBASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 AC099521.3-201ENST00000624251 2938 ntBASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 FAM210CP-201ENST00000445714 574 ntBASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 Z69720.1-201ENST00000601483 472 ntBASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 AL138831.2-201ENST00000606564 490 ntBASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 AP001350.2-201ENST00000625104 1094 ntBASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP4Q6PIL6 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP4Q6PIL6 WASH6P-202ENST00000359512 1437 ntBASIC12.11□□□□□ -0.47
KCNIP4Q6PIL6 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP4Q6PIL6 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
KCNIP4Q6PIL6 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP4Q6PIL6 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP4Q6PIL6 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP4Q6PIL6 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
KCNIP4Q6PIL6 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.11□□□□□ -0.47
KCNIP4Q6PIL6 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP4Q6PIL6 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP4Q6PIL6 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP4Q6PIL6 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP4Q6PIL6 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP4Q6PIL6 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP4Q6PIL6 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP4Q6PIL6 AC011474.4-201ENST00000623523 2076 ntBASIC12.11□□□□□ -0.47
KCNIP4Q6PIL6 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC12.11□□□□□ -0.47
KCNIP4Q6PIL6 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
KCNIP4Q6PIL6 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP4Q6PIL6 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP4Q6PIL6 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP4Q6PIL6 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
KCNIP4Q6PIL6 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP4Q6PIL6 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms