Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 PTCHD3P3-201ENST00000403073 906 ntBASIC13.68□□□□□ -0.22
C11orf88Q6PI97 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 AC079781.5-202ENST00000641784 3743 ntBASIC13.68□□□□□ -0.22
C11orf88Q6PI97 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 SNX33P1-201ENST00000592116 1762 ntBASIC13.68□□□□□ -0.22
C11orf88Q6PI97 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf88Q6PI97 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms