Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.21□□□□□ -0.13
NIPAL3Q6P499 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.21□□□□□ -0.13
NIPAL3Q6P499 AC015911.4-201ENST00000588022 1070 ntBASIC14.21□□□□□ -0.13
NIPAL3Q6P499 AC106028.4-201ENST00000614509 607 ntBASIC14.21□□□□□ -0.13
NIPAL3Q6P499 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL3Q6P499 LINC00528-201ENST00000600723 2160 ntBASIC14.21□□□□□ -0.13
NIPAL3Q6P499 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL3Q6P499 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.21□□□□□ -0.13
NIPAL3Q6P499 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.21□□□□□ -0.13
NIPAL3Q6P499 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL3Q6P499 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL3Q6P499 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
NIPAL3Q6P499 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NIPAL3Q6P499 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
NIPAL3Q6P499 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.21□□□□□ -0.14
NIPAL3Q6P499 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.21□□□□□ -0.14
NIPAL3Q6P499 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
NIPAL3Q6P499 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NIPAL3Q6P499 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NIPAL3Q6P499 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NIPAL3Q6P499 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
NIPAL3Q6P499 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
NIPAL3Q6P499 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.21□□□□□ -0.14
NIPAL3Q6P499 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.21□□□□□ -0.14
NIPAL3Q6P499 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NIPAL3Q6P499 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NIPAL3Q6P499 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
NIPAL3Q6P499 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NIPAL3Q6P499 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NIPAL3Q6P499 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.2□□□□□ -0.14
NIPAL3Q6P499 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NIPAL3Q6P499 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NIPAL3Q6P499 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NIPAL3Q6P499 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NIPAL3Q6P499 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NIPAL3Q6P499 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.2□□□□□ -0.14
NIPAL3Q6P499 PMS2P2-201ENST00000425039 1128 ntBASIC14.2□□□□□ -0.14
NIPAL3Q6P499 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NIPAL3Q6P499 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
NIPAL3Q6P499 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.2□□□□□ -0.14
NIPAL3Q6P499 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.2□□□□□ -0.14
NIPAL3Q6P499 AL079307.3-201ENST00000556114 283 ntBASIC14.2□□□□□ -0.14
NIPAL3Q6P499 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.2□□□□□ -0.14
NIPAL3Q6P499 AC140878.1-201ENST00000565277 250 ntBASIC14.2□□□□□ -0.14
NIPAL3Q6P499 AC051619.7-201ENST00000568314 623 ntBASIC14.2□□□□□ -0.14
NIPAL3Q6P499 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.2□□□□□ -0.14
NIPAL3Q6P499 AL450472.2-201ENST00000603663 1156 ntBASIC14.2□□□□□ -0.14
NIPAL3Q6P499 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.2□□□□□ -0.14
NIPAL3Q6P499 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NIPAL3Q6P499 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.2□□□□□ -0.14
NIPAL3Q6P499 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
NIPAL3Q6P499 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.2□□□□□ -0.14
NIPAL3Q6P499 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.2□□□□□ -0.14
NIPAL3Q6P499 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NIPAL3Q6P499 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
NIPAL3Q6P499 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.2□□□□□ -0.14
NIPAL3Q6P499 AL365209.1-201ENST00000624418 6473 ntBASIC14.2□□□□□ -0.14
NIPAL3Q6P499 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
NIPAL3Q6P499 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NIPAL3Q6P499 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NIPAL3Q6P499 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.2□□□□□ -0.14
NIPAL3Q6P499 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
NIPAL3Q6P499 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
NIPAL3Q6P499 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NIPAL3Q6P499 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NIPAL3Q6P499 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NIPAL3Q6P499 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NIPAL3Q6P499 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
NIPAL3Q6P499 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.19□□□□□ -0.14
NIPAL3Q6P499 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NIPAL3Q6P499 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NIPAL3Q6P499 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.19□□□□□ -0.14
NIPAL3Q6P499 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NIPAL3Q6P499 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
NIPAL3Q6P499 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
NIPAL3Q6P499 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NIPAL3Q6P499 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NIPAL3Q6P499 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
NIPAL3Q6P499 MROH4P-201ENST00000431302 1578 ntBASIC14.19□□□□□ -0.14
NIPAL3Q6P499 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NIPAL3Q6P499 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NIPAL3Q6P499 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NIPAL3Q6P499 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.19□□□□□ -0.14
NIPAL3Q6P499 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
NIPAL3Q6P499 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
NIPAL3Q6P499 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.19□□□□□ -0.14
NIPAL3Q6P499 IGHV3-42-201ENST00000520410 361 ntBASIC14.19□□□□□ -0.14
NIPAL3Q6P499 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.19□□□□□ -0.14
NIPAL3Q6P499 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.19□□□□□ -0.14
NIPAL3Q6P499 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.19□□□□□ -0.14
NIPAL3Q6P499 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.19□□□□□ -0.14
NIPAL3Q6P499 SPDYE12P-201ENST00000618416 771 ntBASIC14.19□□□□□ -0.14
NIPAL3Q6P499 AC073592.8-201ENST00000624126 511 ntBASIC14.19□□□□□ -0.14
NIPAL3Q6P499 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NIPAL3Q6P499 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NIPAL3Q6P499 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NIPAL3Q6P499 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NIPAL3Q6P499 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.19□□□□□ -0.14
NIPAL3Q6P499 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.19□□□□□ -0.14
NIPAL3Q6P499 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms