Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RIF1Q5UIP0 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RIF1Q5UIP0 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RIF1Q5UIP0 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RIF1Q5UIP0 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RIF1Q5UIP0 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.83□□□□□ -0.04
RIF1Q5UIP0 DUX4L46-201ENST00000566845 751 ntBASIC14.83□□□□□ -0.04
RIF1Q5UIP0 AC097359.3-201ENST00000603982 1210 ntBASIC14.83□□□□□ -0.04
RIF1Q5UIP0 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.83□□□□□ -0.04
RIF1Q5UIP0 MBLAC2-202ENST00000514906 1936 ntBASIC14.83□□□□□ -0.04
RIF1Q5UIP0 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RIF1Q5UIP0 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.82□□□□□ -0.04
RIF1Q5UIP0 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RIF1Q5UIP0 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RIF1Q5UIP0 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
RIF1Q5UIP0 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.81□□□□□ -0.04
RIF1Q5UIP0 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RIF1Q5UIP0 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RIF1Q5UIP0 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC14.81□□□□□ -0.04
RIF1Q5UIP0 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RIF1Q5UIP0 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RIF1Q5UIP0 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
RIF1Q5UIP0 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
RIF1Q5UIP0 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RIF1Q5UIP0 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.81□□□□□ -0.04
RIF1Q5UIP0 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RIF1Q5UIP0 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.81□□□□□ -0.04
RIF1Q5UIP0 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
RIF1Q5UIP0 AL645933.1-201ENST00000440087 609 ntBASIC14.81□□□□□ -0.04
RIF1Q5UIP0 AC004837.1-201ENST00000446267 564 ntBASIC14.81□□□□□ -0.04
RIF1Q5UIP0 RN7SL846P-201ENST00000467429 292 ntBASIC14.81□□□□□ -0.04
RIF1Q5UIP0 PMEL-214ENST00000550447 901 ntTSL 3 BASIC14.81□□□□□ -0.04
RIF1Q5UIP0 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
RIF1Q5UIP0 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RIF1Q5UIP0 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RIF1Q5UIP0 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.81□□□□□ -0.04
RIF1Q5UIP0 AL158070.2-201ENST00000623713 1621 ntBASIC14.81□□□□□ -0.04
RIF1Q5UIP0 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
RIF1Q5UIP0 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.81□□□□□ -0.04
RIF1Q5UIP0 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.81□□□□□ -0.04
RIF1Q5UIP0 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.81□□□□□ -0.04
RIF1Q5UIP0 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RIF1Q5UIP0 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC14.81□□□□□ -0.04
RIF1Q5UIP0 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
RIF1Q5UIP0 BAK1P1-201ENST00000317045 636 ntBASIC14.81□□□□□ -0.04
RIF1Q5UIP0 AL592076.1-201ENST00000424448 303 ntBASIC14.81□□□□□ -0.04
RIF1Q5UIP0 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC14.81□□□□□ -0.04
RIF1Q5UIP0 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RIF1Q5UIP0 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
RIF1Q5UIP0 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
RIF1Q5UIP0 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.81□□□□□ -0.04
RIF1Q5UIP0 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms