Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC11.89□□□□□ -0.51
LINC01559Q495D7 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC11.89□□□□□ -0.51
LINC01559Q495D7 MTCO2P3-201ENST00000442543 421 ntBASIC11.89□□□□□ -0.51
LINC01559Q495D7 SAPCD2P3-201ENST00000455031 850 ntBASIC11.89□□□□□ -0.51
LINC01559Q495D7 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01559Q495D7 KRT18P34-201ENST00000488218 1270 ntBASIC11.89□□□□□ -0.51
LINC01559Q495D7 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC11.89□□□□□ -0.51
LINC01559Q495D7 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC11.89□□□□□ -0.51
LINC01559Q495D7 KRT18P21-201ENST00000515767 1272 ntBASIC11.89□□□□□ -0.51
LINC01559Q495D7 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC11.89□□□□□ -0.51
LINC01559Q495D7 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC11.89□□□□□ -0.51
LINC01559Q495D7 NEU3-202ENST00000526068 431 ntTSL 2 BASIC11.89□□□□□ -0.51
LINC01559Q495D7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
LINC01559Q495D7 OR7E47P-204ENST00000575924 449 ntBASIC11.89□□□□□ -0.51
LINC01559Q495D7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC11.89□□□□□ -0.51
LINC01559Q495D7 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC11.89□□□□□ -0.51
LINC01559Q495D7 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC11.89□□□□□ -0.51
LINC01559Q495D7 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC11.89□□□□□ -0.51
LINC01559Q495D7 CU459211.1-201ENST00000635667 749 ntBASIC11.89□□□□□ -0.51
LINC01559Q495D7 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC11.89□□□□□ -0.51
LINC01559Q495D7 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC11.89□□□□□ -0.51
LINC01559Q495D7 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
LINC01559Q495D7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC11.89□□□□□ -0.51
LINC01559Q495D7 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01559Q495D7 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01559Q495D7 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
LINC01559Q495D7 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01559Q495D7 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01559Q495D7 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01559Q495D7 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
LINC01559Q495D7 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
LINC01559Q495D7 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC11.89□□□□□ -0.51
LINC01559Q495D7 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC11.89□□□□□ -0.51
LINC01559Q495D7 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01559Q495D7 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01559Q495D7 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01559Q495D7 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01559Q495D7 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01559Q495D7 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01559Q495D7 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC11.89□□□□□ -0.51
LINC01559Q495D7 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01559Q495D7 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01559Q495D7 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
LINC01559Q495D7 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01559Q495D7 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01559Q495D7 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01559Q495D7 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01559Q495D7 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01559Q495D7 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01559Q495D7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01559Q495D7 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC11.88□□□□□ -0.51
LINC01559Q495D7 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01559Q495D7 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC11.88□□□□□ -0.51
LINC01559Q495D7 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC11.88□□□□□ -0.51
LINC01559Q495D7 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC11.88□□□□□ -0.51
LINC01559Q495D7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01559Q495D7 WASH6P-202ENST00000359512 1437 ntBASIC11.88□□□□□ -0.51
LINC01559Q495D7 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01559Q495D7 VAX1-201ENST00000277905 4494 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01559Q495D7 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC11.88□□□□□ -0.51
LINC01559Q495D7 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01559Q495D7 LINC02525-202ENST00000435043 1505 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01559Q495D7 AC092127.1-201ENST00000567093 3455 ntBASIC11.88□□□□□ -0.51
LINC01559Q495D7 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC11.88□□□□□ -0.51
LINC01559Q495D7 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01559Q495D7 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
LINC01559Q495D7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01559Q495D7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC11.88□□□□□ -0.51
LINC01559Q495D7 C9orf85-203ENST00000377031 1107 ntTSL 3 BASIC11.88□□□□□ -0.51
LINC01559Q495D7 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC11.88□□□□□ -0.51
LINC01559Q495D7 TMEM213-201ENST00000397602 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01559Q495D7 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC11.88□□□□□ -0.51
LINC01559Q495D7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC11.88□□□□□ -0.51
LINC01559Q495D7 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC11.88□□□□□ -0.51
LINC01559Q495D7 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC11.88□□□□□ -0.51
LINC01559Q495D7 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC11.88□□□□□ -0.51
LINC01559Q495D7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC11.88□□□□□ -0.51
LINC01559Q495D7 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC11.88□□□□□ -0.51
LINC01559Q495D7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01559Q495D7 AC090772.3-201ENST00000583267 735 ntTSL 3 BASIC11.88□□□□□ -0.51
LINC01559Q495D7 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01559Q495D7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC11.88□□□□□ -0.51
LINC01559Q495D7 AC005066.1-201ENST00000613582 1007 ntBASIC11.88□□□□□ -0.51
LINC01559Q495D7 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC11.88□□□□□ -0.51
LINC01559Q495D7 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC11.88□□□□□ -0.51
LINC01559Q495D7 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC11.88□□□□□ -0.51
LINC01559Q495D7 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
LINC01559Q495D7 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC11.88□□□□□ -0.51
LINC01559Q495D7 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01559Q495D7 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01559Q495D7 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
LINC01559Q495D7 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
LINC01559Q495D7 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01559Q495D7 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01559Q495D7 ILF3-AS1-201ENST00000591501 1983 ntBASIC11.88□□□□□ -0.51
LINC01559Q495D7 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01559Q495D7 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01559Q495D7 MTND5P31-201ENST00000419366 1374 ntBASIC11.88□□□□□ -0.51
LINC01559Q495D7 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01559Q495D7 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms