Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.05■□□□□ 0.48
CCDC144BQ3MJ40 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC144BQ3MJ40 AL592424.1-201ENST00000563624 1536 ntBASIC18.05■□□□□ 0.48
CCDC144BQ3MJ40 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC144BQ3MJ40 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC18.05■□□□□ 0.48
CCDC144BQ3MJ40 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC144BQ3MJ40 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC144BQ3MJ40 AC004987.2-201ENST00000395959 1148 ntBASIC18.05■□□□□ 0.48
CCDC144BQ3MJ40 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC144BQ3MJ40 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC144BQ3MJ40 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.05■□□□□ 0.48
CCDC144BQ3MJ40 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC144BQ3MJ40 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.05■□□□□ 0.48
CCDC144BQ3MJ40 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18.05■□□□□ 0.48
CCDC144BQ3MJ40 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.05■□□□□ 0.48
CCDC144BQ3MJ40 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CCDC144BQ3MJ40 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.05■□□□□ 0.48
CCDC144BQ3MJ40 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC144BQ3MJ40 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CCDC144BQ3MJ40 AL391069.4-201ENST00000609583 481 ntBASIC18.05■□□□□ 0.48
CCDC144BQ3MJ40 RPSAP52-203ENST00000622976 1023 ntBASIC18.05■□□□□ 0.48
CCDC144BQ3MJ40 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC144BQ3MJ40 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC144BQ3MJ40 TMBIM7P-203ENST00000641617 1718 ntBASIC18.05■□□□□ 0.48
CCDC144BQ3MJ40 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC144BQ3MJ40 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC144BQ3MJ40 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC144BQ3MJ40 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC144BQ3MJ40 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.05■□□□□ 0.48
CCDC144BQ3MJ40 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
CCDC144BQ3MJ40 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC144BQ3MJ40 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC144BQ3MJ40 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC144BQ3MJ40 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC144BQ3MJ40 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC144BQ3MJ40 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC144BQ3MJ40 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC144BQ3MJ40 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC144BQ3MJ40 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC144BQ3MJ40 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC144BQ3MJ40 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC144BQ3MJ40 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC144BQ3MJ40 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
CCDC144BQ3MJ40 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
CCDC144BQ3MJ40 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC144BQ3MJ40 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC144BQ3MJ40 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CCDC144BQ3MJ40 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC144BQ3MJ40 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CCDC144BQ3MJ40 AZGP1P1-201ENST00000411909 902 ntBASIC18.04■□□□□ 0.48
CCDC144BQ3MJ40 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC18.04■□□□□ 0.48
CCDC144BQ3MJ40 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.04■□□□□ 0.48
CCDC144BQ3MJ40 KRT223P-202ENST00000449164 1292 ntBASIC18.04■□□□□ 0.48
CCDC144BQ3MJ40 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CCDC144BQ3MJ40 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.04■□□□□ 0.48
CCDC144BQ3MJ40 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC18.04■□□□□ 0.48
CCDC144BQ3MJ40 AL033527.4-201ENST00000641026 673 ntBASIC18.04■□□□□ 0.48
CCDC144BQ3MJ40 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC144BQ3MJ40 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC144BQ3MJ40 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC144BQ3MJ40 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.04■□□□□ 0.48
CCDC144BQ3MJ40 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC144BQ3MJ40 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC144BQ3MJ40 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CCDC144BQ3MJ40 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC144BQ3MJ40 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC144BQ3MJ40 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC144BQ3MJ40 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.04■□□□□ 0.48
CCDC144BQ3MJ40 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC144BQ3MJ40 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC144BQ3MJ40 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC144BQ3MJ40 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC18.03■□□□□ 0.48
CCDC144BQ3MJ40 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CCDC144BQ3MJ40 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC144BQ3MJ40 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC144BQ3MJ40 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC144BQ3MJ40 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC144BQ3MJ40 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC144BQ3MJ40 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC144BQ3MJ40 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CCDC144BQ3MJ40 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC144BQ3MJ40 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC144BQ3MJ40 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC144BQ3MJ40 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC144BQ3MJ40 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC144BQ3MJ40 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC144BQ3MJ40 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
CCDC144BQ3MJ40 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CCDC144BQ3MJ40 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC144BQ3MJ40 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.03■□□□□ 0.48
CCDC144BQ3MJ40 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC144BQ3MJ40 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.03■□□□□ 0.48
CCDC144BQ3MJ40 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.03■□□□□ 0.48
CCDC144BQ3MJ40 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
CCDC144BQ3MJ40 AC133552.6-201ENST00000613406 534 ntBASIC18.03■□□□□ 0.48
CCDC144BQ3MJ40 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CCDC144BQ3MJ40 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC144BQ3MJ40 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC144BQ3MJ40 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CCDC144BQ3MJ40 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms