Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HMGCS1Q01581 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HMGCS1Q01581 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
HMGCS1Q01581 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HMGCS1Q01581 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.02■□□□□ -0
HMGCS1Q01581 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
HMGCS1Q01581 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
HMGCS1Q01581 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.02■□□□□ -0
HMGCS1Q01581 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.02■□□□□ -0
HMGCS1Q01581 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HMGCS1Q01581 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.02■□□□□ -0
HMGCS1Q01581 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
HMGCS1Q01581 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.02■□□□□ -0
HMGCS1Q01581 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.02■□□□□ -0
HMGCS1Q01581 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.02■□□□□ -0
HMGCS1Q01581 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.02■□□□□ -0
HMGCS1Q01581 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.02■□□□□ -0
HMGCS1Q01581 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
HMGCS1Q01581 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.02■□□□□ -0
HMGCS1Q01581 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.02■□□□□ -0
HMGCS1Q01581 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.02■□□□□ -0
HMGCS1Q01581 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.02■□□□□ -0
HMGCS1Q01581 LINC00628-201ENST00000628516 1289 ntBASIC15.02■□□□□ -0
HMGCS1Q01581 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.02■□□□□ -0
HMGCS1Q01581 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
HMGCS1Q01581 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HMGCS1Q01581 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HMGCS1Q01581 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HMGCS1Q01581 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.02□□□□□ -0.01
HMGCS1Q01581 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HMGCS1Q01581 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.02□□□□□ -0.01
HMGCS1Q01581 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HMGCS1Q01581 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.02□□□□□ -0.01
HMGCS1Q01581 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.02□□□□□ -0.01
HMGCS1Q01581 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HMGCS1Q01581 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
HMGCS1Q01581 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCS1Q01581 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCS1Q01581 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCS1Q01581 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCS1Q01581 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCS1Q01581 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
HMGCS1Q01581 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
HMGCS1Q01581 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.01□□□□□ -0.01
HMGCS1Q01581 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCS1Q01581 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCS1Q01581 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCS1Q01581 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCS1Q01581 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCS1Q01581 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCS1Q01581 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCS1Q01581 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCS1Q01581 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCS1Q01581 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCS1Q01581 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCS1Q01581 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.01□□□□□ -0.01
HMGCS1Q01581 RPL37AP1-201ENST00000412502 279 ntBASIC15.01□□□□□ -0.01
HMGCS1Q01581 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.01□□□□□ -0.01
HMGCS1Q01581 KRT18P64-201ENST00000434946 1219 ntBASIC15.01□□□□□ -0.01
HMGCS1Q01581 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCS1Q01581 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.01□□□□□ -0.01
HMGCS1Q01581 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.01□□□□□ -0.01
HMGCS1Q01581 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.01□□□□□ -0.01
HMGCS1Q01581 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
HMGCS1Q01581 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.01□□□□□ -0.01
HMGCS1Q01581 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCS1Q01581 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.01□□□□□ -0.01
HMGCS1Q01581 AC069262.1-201ENST00000539058 672 ntBASIC15.01□□□□□ -0.01
HMGCS1Q01581 AL512356.2-201ENST00000546955 174 ntBASIC15.01□□□□□ -0.01
HMGCS1Q01581 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.01□□□□□ -0.01
HMGCS1Q01581 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.01□□□□□ -0.01
HMGCS1Q01581 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.01□□□□□ -0.01
HMGCS1Q01581 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.01□□□□□ -0.01
HMGCS1Q01581 MIR6069-201ENST00000620069 79 ntBASIC15.01□□□□□ -0.01
HMGCS1Q01581 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HMGCS1Q01581 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCS1Q01581 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
HMGCS1Q01581 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.01□□□□□ -0.01
HMGCS1Q01581 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCS1Q01581 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.01□□□□□ -0.01
HMGCS1Q01581 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCS1Q01581 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCS1Q01581 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCS1Q01581 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCS1Q01581 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCS1Q01581 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCS1Q01581 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.01□□□□□ -0.01
HMGCS1Q01581 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCS1Q01581 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCS1Q01581 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCS1Q01581 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCS1Q01581 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.01□□□□□ -0.01
HMGCS1Q01581 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCS1Q01581 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
HMGCS1Q01581 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
HMGCS1Q01581 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15□□□□□ -0.01
HMGCS1Q01581 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15□□□□□ -0.01
HMGCS1Q01581 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15□□□□□ -0.01
HMGCS1Q01581 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
HMGCS1Q01581 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms