Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.72□□□□□ -0.21
SEC61A1P61619 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SEC61A1P61619 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.72□□□□□ -0.21
SEC61A1P61619 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.72□□□□□ -0.21
SEC61A1P61619 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SEC61A1P61619 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.72□□□□□ -0.21
SEC61A1P61619 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.72□□□□□ -0.21
SEC61A1P61619 FAM86GP-201ENST00000448322 971 ntBASIC13.72□□□□□ -0.21
SEC61A1P61619 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.72□□□□□ -0.21
SEC61A1P61619 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.72□□□□□ -0.21
SEC61A1P61619 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.72□□□□□ -0.21
SEC61A1P61619 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.72□□□□□ -0.21
SEC61A1P61619 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SEC61A1P61619 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.72□□□□□ -0.21
SEC61A1P61619 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.72□□□□□ -0.21
SEC61A1P61619 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
SEC61A1P61619 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.72□□□□□ -0.21
SEC61A1P61619 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SEC61A1P61619 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.72□□□□□ -0.21
SEC61A1P61619 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.72□□□□□ -0.21
SEC61A1P61619 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.72□□□□□ -0.21
SEC61A1P61619 AC084121.4-201ENST00000641598 221 ntBASIC13.72□□□□□ -0.21
SEC61A1P61619 AF228730.8-201ENST00000642140 221 ntBASIC13.72□□□□□ -0.21
SEC61A1P61619 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.72□□□□□ -0.21
SEC61A1P61619 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.72□□□□□ -0.21
SEC61A1P61619 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SEC61A1P61619 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SEC61A1P61619 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SEC61A1P61619 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SEC61A1P61619 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SEC61A1P61619 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.72□□□□□ -0.21
SEC61A1P61619 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SEC61A1P61619 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SEC61A1P61619 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SEC61A1P61619 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SEC61A1P61619 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SEC61A1P61619 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.72□□□□□ -0.21
SEC61A1P61619 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.72□□□□□ -0.21
SEC61A1P61619 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
SEC61A1P61619 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SEC61A1P61619 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SEC61A1P61619 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.72□□□□□ -0.21
SEC61A1P61619 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SEC61A1P61619 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SEC61A1P61619 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
SEC61A1P61619 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.71□□□□□ -0.21
SEC61A1P61619 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SEC61A1P61619 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SEC61A1P61619 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SEC61A1P61619 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
SEC61A1P61619 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SEC61A1P61619 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SEC61A1P61619 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.71□□□□□ -0.21
SEC61A1P61619 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SEC61A1P61619 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
SEC61A1P61619 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SEC61A1P61619 AC073439.1-201ENST00000624121 1774 ntBASIC13.71□□□□□ -0.21
SEC61A1P61619 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SEC61A1P61619 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SEC61A1P61619 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SEC61A1P61619 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SEC61A1P61619 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.71□□□□□ -0.21
SEC61A1P61619 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SEC61A1P61619 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
SEC61A1P61619 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SEC61A1P61619 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SEC61A1P61619 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
SEC61A1P61619 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SEC61A1P61619 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SEC61A1P61619 AC142381.1-201ENST00000426099 345 ntBASIC13.71□□□□□ -0.21
SEC61A1P61619 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.71□□□□□ -0.21
SEC61A1P61619 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SEC61A1P61619 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.71□□□□□ -0.21
SEC61A1P61619 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.71□□□□□ -0.21
SEC61A1P61619 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
SEC61A1P61619 PRYP6-201ENST00000514804 343 ntBASIC13.71□□□□□ -0.21
SEC61A1P61619 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SEC61A1P61619 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.71□□□□□ -0.21
SEC61A1P61619 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SEC61A1P61619 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.71□□□□□ -0.21
SEC61A1P61619 AP001059.3-201ENST00000619053 235 ntBASIC13.71□□□□□ -0.21
SEC61A1P61619 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.71□□□□□ -0.21
SEC61A1P61619 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.71□□□□□ -0.21
SEC61A1P61619 AC087481.3-201ENST00000602886 1894 ntBASIC13.71□□□□□ -0.21
SEC61A1P61619 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
SEC61A1P61619 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
SEC61A1P61619 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.71□□□□□ -0.22
SEC61A1P61619 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SEC61A1P61619 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SEC61A1P61619 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SEC61A1P61619 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SEC61A1P61619 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
SEC61A1P61619 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SEC61A1P61619 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SEC61A1P61619 AC008677.1-201ENST00000519230 1561 ntBASIC13.71□□□□□ -0.22
SEC61A1P61619 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
SEC61A1P61619 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
SEC61A1P61619 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SEC61A1P61619 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.7□□□□□ -0.22
SEC61A1P61619 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms