Protein–RNA interactions for Protein: P56945

BCAR1, Breast cancer anti-estrogen resistance protein 1, humanhuman

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAR1P56945 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.81■□□□□ 0.28
BCAR1P56945 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.81■□□□□ 0.28
BCAR1P56945 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BCAR1P56945 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.81■□□□□ 0.28
BCAR1P56945 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.81■□□□□ 0.28
BCAR1P56945 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BCAR1P56945 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.81■□□□□ 0.28
BCAR1P56945 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
BCAR1P56945 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BCAR1P56945 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.81■□□□□ 0.28
BCAR1P56945 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BCAR1P56945 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
BCAR1P56945 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
BCAR1P56945 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
BCAR1P56945 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BCAR1P56945 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BCAR1P56945 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BCAR1P56945 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BCAR1P56945 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.81■□□□□ 0.28
BCAR1P56945 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.81■□□□□ 0.28
BCAR1P56945 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.81■□□□□ 0.28
BCAR1P56945 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BCAR1P56945 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BCAR1P56945 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.81■□□□□ 0.28
BCAR1P56945 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.81■□□□□ 0.28
BCAR1P56945 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BCAR1P56945 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.8■□□□□ 0.28
BCAR1P56945 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BCAR1P56945 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BCAR1P56945 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
BCAR1P56945 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
BCAR1P56945 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BCAR1P56945 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BCAR1P56945 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
BCAR1P56945 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BCAR1P56945 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
BCAR1P56945 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
BCAR1P56945 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BCAR1P56945 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BCAR1P56945 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BCAR1P56945 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.8■□□□□ 0.28
BCAR1P56945 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BCAR1P56945 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
BCAR1P56945 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
BCAR1P56945 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BCAR1P56945 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.8■□□□□ 0.28
BCAR1P56945 BRWD1P1-201ENST00000401091 371 ntBASIC16.8■□□□□ 0.28
BCAR1P56945 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.8■□□□□ 0.28
BCAR1P56945 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
BCAR1P56945 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.8■□□□□ 0.28
BCAR1P56945 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BCAR1P56945 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.8■□□□□ 0.28
BCAR1P56945 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.8■□□□□ 0.28
BCAR1P56945 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.8■□□□□ 0.28
BCAR1P56945 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.8■□□□□ 0.28
BCAR1P56945 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
BCAR1P56945 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.8■□□□□ 0.28
BCAR1P56945 AC244669.2-201ENST00000612320 853 ntBASIC16.8■□□□□ 0.28
BCAR1P56945 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BCAR1P56945 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.8■□□□□ 0.28
BCAR1P56945 MIR6869-201ENST00000619434 62 ntBASIC16.8■□□□□ 0.28
BCAR1P56945 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BCAR1P56945 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BCAR1P56945 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.8■□□□□ 0.28
BCAR1P56945 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
BCAR1P56945 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.8■□□□□ 0.28
BCAR1P56945 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BCAR1P56945 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
BCAR1P56945 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
BCAR1P56945 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
BCAR1P56945 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
BCAR1P56945 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
BCAR1P56945 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.8■□□□□ 0.28
BCAR1P56945 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BCAR1P56945 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BCAR1P56945 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
BCAR1P56945 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
BCAR1P56945 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
BCAR1P56945 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.79■□□□□ 0.28
BCAR1P56945 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BCAR1P56945 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BCAR1P56945 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
BCAR1P56945 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.79■□□□□ 0.28
BCAR1P56945 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BCAR1P56945 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BCAR1P56945 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BCAR1P56945 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BCAR1P56945 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
BCAR1P56945 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BCAR1P56945 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BCAR1P56945 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
BCAR1P56945 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BCAR1P56945 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.79■□□□□ 0.28
BCAR1P56945 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
BCAR1P56945 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
BCAR1P56945 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
BCAR1P56945 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.79■□□□□ 0.28
BCAR1P56945 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.79■□□□□ 0.28
BCAR1P56945 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
BCAR1P56945 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms