Protein–RNA interactions for Protein: P55084

HADHB, Trifunctional enzyme subunit beta, mitochondrial, humanhuman

Known RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHBP55084 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
HADHBP55084 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.22■□□□□ 0.19
HADHBP55084 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HADHBP55084 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.22■□□□□ 0.19
HADHBP55084 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.22■□□□□ 0.19
HADHBP55084 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.22■□□□□ 0.19
HADHBP55084 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.22■□□□□ 0.19
HADHBP55084 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.22■□□□□ 0.19
HADHBP55084 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.22■□□□□ 0.19
HADHBP55084 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
HADHBP55084 SAMD11P1-201ENST00000571429 661 ntBASIC16.22■□□□□ 0.19
HADHBP55084 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.22■□□□□ 0.19
HADHBP55084 AC015911.4-201ENST00000588022 1070 ntBASIC16.22■□□□□ 0.19
HADHBP55084 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.22■□□□□ 0.19
HADHBP55084 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HADHBP55084 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HADHBP55084 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HADHBP55084 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HADHBP55084 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HADHBP55084 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HADHBP55084 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.22■□□□□ 0.19
HADHBP55084 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HADHBP55084 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.22■□□□□ 0.19
HADHBP55084 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.22■□□□□ 0.19
HADHBP55084 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HADHBP55084 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HADHBP55084 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
HADHBP55084 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.21■□□□□ 0.19
HADHBP55084 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HADHBP55084 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HADHBP55084 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.21■□□□□ 0.19
HADHBP55084 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HADHBP55084 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HADHBP55084 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.21■□□□□ 0.19
HADHBP55084 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HADHBP55084 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HADHBP55084 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HADHBP55084 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HADHBP55084 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HADHBP55084 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HADHBP55084 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
HADHBP55084 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.21■□□□□ 0.19
HADHBP55084 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HADHBP55084 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
HADHBP55084 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HADHBP55084 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.21■□□□□ 0.19
HADHBP55084 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.21■□□□□ 0.19
HADHBP55084 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.21■□□□□ 0.19
HADHBP55084 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.21■□□□□ 0.19
HADHBP55084 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HADHBP55084 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.21■□□□□ 0.19
HADHBP55084 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.21■□□□□ 0.19
HADHBP55084 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HADHBP55084 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.21■□□□□ 0.19
HADHBP55084 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.21■□□□□ 0.19
HADHBP55084 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.21■□□□□ 0.19
HADHBP55084 AL109936.8-201ENST00000641772 604 ntBASIC16.21■□□□□ 0.19
HADHBP55084 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HADHBP55084 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
HADHBP55084 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HADHBP55084 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HADHBP55084 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HADHBP55084 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HADHBP55084 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HADHBP55084 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HADHBP55084 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.21■□□□□ 0.18
HADHBP55084 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.21■□□□□ 0.18
HADHBP55084 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HADHBP55084 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HADHBP55084 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.21■□□□□ 0.18
HADHBP55084 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HADHBP55084 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.2■□□□□ 0.18
HADHBP55084 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.2■□□□□ 0.18
HADHBP55084 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HADHBP55084 AC087499.5-201ENST00000452760 1342 ntBASIC16.2■□□□□ 0.18
HADHBP55084 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HADHBP55084 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HADHBP55084 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.2■□□□□ 0.18
HADHBP55084 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.2■□□□□ 0.18
HADHBP55084 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
HADHBP55084 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.2■□□□□ 0.18
HADHBP55084 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HADHBP55084 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
HADHBP55084 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HADHBP55084 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HADHBP55084 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
HADHBP55084 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HADHBP55084 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HADHBP55084 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.2■□□□□ 0.18
HADHBP55084 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.2■□□□□ 0.18
HADHBP55084 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.2■□□□□ 0.18
HADHBP55084 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.2■□□□□ 0.18
HADHBP55084 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HADHBP55084 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.2■□□□□ 0.18
HADHBP55084 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.2■□□□□ 0.18
HADHBP55084 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.2■□□□□ 0.18
HADHBP55084 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.2■□□□□ 0.18
HADHBP55084 AC109322.1-201ENST00000524499 1264 ntBASIC16.2■□□□□ 0.18
HADHBP55084 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.2■□□□□ 0.18
HADHBP55084 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms