Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC25A1P53007 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC25A1P53007 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
SLC25A1P53007 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SLC25A1P53007 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC25A1P53007 AC104457.1-201ENST00000401024 814 ntBASIC13.83□□□□□ -0.2
SLC25A1P53007 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.83□□□□□ -0.2
SLC25A1P53007 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SLC25A1P53007 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.83□□□□□ -0.2
SLC25A1P53007 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.83□□□□□ -0.2
SLC25A1P53007 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.83□□□□□ -0.2
SLC25A1P53007 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.83□□□□□ -0.2
SLC25A1P53007 MIR3687-2-201ENST00000577708 61 ntBASIC13.83□□□□□ -0.2
SLC25A1P53007 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC25A1P53007 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.83□□□□□ -0.2
SLC25A1P53007 AC025048.3-201ENST00000590609 569 ntBASIC13.83□□□□□ -0.2
SLC25A1P53007 WDR88-203ENST00000592765 651 ntTSL 5 BASIC13.83□□□□□ -0.2
SLC25A1P53007 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.83□□□□□ -0.2
SLC25A1P53007 MIR3687-1-201ENST00000614492 61 ntBASIC13.83□□□□□ -0.2
SLC25A1P53007 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.83□□□□□ -0.2
SLC25A1P53007 AC005702.4-201ENST00000618393 416 ntBASIC13.83□□□□□ -0.2
SLC25A1P53007 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC25A1P53007 AL033527.5-202ENST00000641632 1098 ntBASIC13.83□□□□□ -0.2
SLC25A1P53007 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC25A1P53007 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
SLC25A1P53007 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC25A1P53007 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC25A1P53007 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC25A1P53007 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC25A1P53007 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SLC25A1P53007 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC25A1P53007 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
SLC25A1P53007 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.83□□□□□ -0.2
SLC25A1P53007 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC25A1P53007 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SLC25A1P53007 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC25A1P53007 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC25A1P53007 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SLC25A1P53007 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC25A1P53007 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC25A1P53007 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLC25A1P53007 LINC00552-201ENST00000625151 2579 ntBASIC13.82□□□□□ -0.2
SLC25A1P53007 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SLC25A1P53007 AP000845.1-201ENST00000581677 2131 ntBASIC13.82□□□□□ -0.2
SLC25A1P53007 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.82□□□□□ -0.2
SLC25A1P53007 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLC25A1P53007 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.82□□□□□ -0.2
SLC25A1P53007 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SLC25A1P53007 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SLC25A1P53007 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLC25A1P53007 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLC25A1P53007 AC012508.2-201ENST00000567613 1472 ntBASIC13.82□□□□□ -0.2
SLC25A1P53007 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLC25A1P53007 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLC25A1P53007 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.82□□□□□ -0.2
SLC25A1P53007 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SLC25A1P53007 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLC25A1P53007 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLC25A1P53007 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLC25A1P53007 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLC25A1P53007 AC015922.1-201ENST00000421102 1152 ntBASIC13.82□□□□□ -0.2
SLC25A1P53007 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.82□□□□□ -0.2
SLC25A1P53007 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.82□□□□□ -0.2
SLC25A1P53007 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.82□□□□□ -0.2
SLC25A1P53007 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.82□□□□□ -0.2
SLC25A1P53007 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
SLC25A1P53007 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.82□□□□□ -0.2
SLC25A1P53007 AL512356.2-201ENST00000546955 174 ntBASIC13.82□□□□□ -0.2
SLC25A1P53007 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SLC25A1P53007 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.82□□□□□ -0.2
SLC25A1P53007 LINC00628-201ENST00000628516 1289 ntBASIC13.82□□□□□ -0.2
SLC25A1P53007 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLC25A1P53007 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SLC25A1P53007 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
SLC25A1P53007 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLC25A1P53007 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SLC25A1P53007 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SLC25A1P53007 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLC25A1P53007 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SLC25A1P53007 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLC25A1P53007 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SLC25A1P53007 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.82□□□□□ -0.2
SLC25A1P53007 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
SLC25A1P53007 AC005089.1-201ENST00000619486 2241 ntBASIC13.82□□□□□ -0.2
SLC25A1P53007 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLC25A1P53007 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SLC25A1P53007 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLC25A1P53007 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLC25A1P53007 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLC25A1P53007 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.81□□□□□ -0.2
SLC25A1P53007 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SLC25A1P53007 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SLC25A1P53007 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.81□□□□□ -0.2
SLC25A1P53007 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLC25A1P53007 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
SLC25A1P53007 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.81□□□□□ -0.2
SLC25A1P53007 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLC25A1P53007 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SLC25A1P53007 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
SLC25A1P53007 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 1215.1 ms