Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PDE6CP51160 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.85■□□□□ 0.29
PDE6CP51160 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.85■□□□□ 0.29
PDE6CP51160 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PDE6CP51160 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDE6CP51160 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.85■□□□□ 0.29
PDE6CP51160 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.85■□□□□ 0.29
PDE6CP51160 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDE6CP51160 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDE6CP51160 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PDE6CP51160 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDE6CP51160 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDE6CP51160 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6CP51160 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6CP51160 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PDE6CP51160 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6CP51160 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6CP51160 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6CP51160 AC112693.3-201ENST00000624819 1983 ntBASIC16.84■□□□□ 0.29
PDE6CP51160 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.84■□□□□ 0.29
PDE6CP51160 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6CP51160 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6CP51160 AC006486.2-201ENST00000624246 2199 ntBASIC16.84■□□□□ 0.29
PDE6CP51160 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6CP51160 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6CP51160 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.84■□□□□ 0.29
PDE6CP51160 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6CP51160 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6CP51160 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PDE6CP51160 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6CP51160 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6CP51160 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
PDE6CP51160 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6CP51160 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.84■□□□□ 0.29
PDE6CP51160 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.84■□□□□ 0.29
PDE6CP51160 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.84■□□□□ 0.29
PDE6CP51160 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.84■□□□□ 0.29
PDE6CP51160 SDHAP3-202ENST00000515467 728 ntBASIC16.84■□□□□ 0.29
PDE6CP51160 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.84■□□□□ 0.29
PDE6CP51160 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.84■□□□□ 0.29
PDE6CP51160 AC010336.2-201ENST00000564226 506 ntBASIC16.84■□□□□ 0.29
PDE6CP51160 AC008738.7-201ENST00000609744 511 ntBASIC16.84■□□□□ 0.29
PDE6CP51160 AC012645.4-201ENST00000610691 1061 ntBASIC16.84■□□□□ 0.29
PDE6CP51160 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.84■□□□□ 0.29
PDE6CP51160 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.84■□□□□ 0.29
PDE6CP51160 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6CP51160 AC063926.2-201ENST00000623766 1308 ntBASIC16.84■□□□□ 0.29
PDE6CP51160 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.84■□□□□ 0.29
PDE6CP51160 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.84■□□□□ 0.29
PDE6CP51160 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.84■□□□□ 0.29
PDE6CP51160 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6CP51160 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6CP51160 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6CP51160 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6CP51160 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6CP51160 FAM45BP-202ENST00000592932 1624 ntBASIC16.84■□□□□ 0.29
PDE6CP51160 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.84■□□□□ 0.29
PDE6CP51160 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6CP51160 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
PDE6CP51160 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
PDE6CP51160 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.84■□□□□ 0.29
PDE6CP51160 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6CP51160 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6CP51160 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PDE6CP51160 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.84■□□□□ 0.29
PDE6CP51160 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6CP51160 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6CP51160 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6CP51160 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6CP51160 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6CP51160 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6CP51160 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PDE6CP51160 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PDE6CP51160 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
PDE6CP51160 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.83■□□□□ 0.29
PDE6CP51160 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
PDE6CP51160 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PDE6CP51160 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDE6CP51160 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDE6CP51160 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDE6CP51160 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.83■□□□□ 0.28
PDE6CP51160 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PDE6CP51160 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
PDE6CP51160 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PDE6CP51160 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PDE6CP51160 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDE6CP51160 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDE6CP51160 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.83■□□□□ 0.28
PDE6CP51160 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.83■□□□□ 0.28
PDE6CP51160 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.83■□□□□ 0.28
PDE6CP51160 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.83■□□□□ 0.28
PDE6CP51160 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDE6CP51160 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDE6CP51160 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.83■□□□□ 0.28
PDE6CP51160 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDE6CP51160 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.83■□□□□ 0.28
PDE6CP51160 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.83■□□□□ 0.28
PDE6CP51160 AL391825.1-201ENST00000457671 1364 ntBASIC16.83■□□□□ 0.28
PDE6CP51160 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PDE6CP51160 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms