Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC18.22■□□□□ 0.51
NEDD4P46934 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
NEDD4P46934 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.22■□□□□ 0.51
NEDD4P46934 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NEDD4P46934 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NEDD4P46934 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
NEDD4P46934 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NEDD4P46934 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.22■□□□□ 0.51
NEDD4P46934 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.22■□□□□ 0.51
NEDD4P46934 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.22■□□□□ 0.51
NEDD4P46934 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NEDD4P46934 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC18.22■□□□□ 0.51
NEDD4P46934 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC18.22■□□□□ 0.51
NEDD4P46934 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.22■□□□□ 0.51
NEDD4P46934 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.22■□□□□ 0.51
NEDD4P46934 AC010319.3-201ENST00000597028 470 ntBASIC18.22■□□□□ 0.51
NEDD4P46934 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.22■□□□□ 0.51
NEDD4P46934 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NEDD4P46934 ABBA01031660.1-201ENST00000635219 756 ntBASIC18.22■□□□□ 0.51
NEDD4P46934 AL645728.2-202ENST00000641679 227 ntBASIC18.22■□□□□ 0.51
NEDD4P46934 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NEDD4P46934 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NEDD4P46934 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC18.22■□□□□ 0.51
NEDD4P46934 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
NEDD4P46934 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC18.21■□□□□ 0.51
NEDD4P46934 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
NEDD4P46934 SLC9A7P1-202ENST00000556476 2239 ntBASIC18.21■□□□□ 0.51
NEDD4P46934 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC18.21■□□□□ 0.51
NEDD4P46934 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
NEDD4P46934 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NEDD4P46934 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NEDD4P46934 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NEDD4P46934 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NEDD4P46934 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.21■□□□□ 0.51
NEDD4P46934 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
NEDD4P46934 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NEDD4P46934 CU639417.3-201ENST00000624240 1404 ntBASIC18.21■□□□□ 0.51
NEDD4P46934 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.21■□□□□ 0.51
NEDD4P46934 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.21■□□□□ 0.51
NEDD4P46934 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NEDD4P46934 REXO1L4P-201ENST00000605109 1937 ntBASIC18.21■□□□□ 0.51
NEDD4P46934 AC006486.2-201ENST00000624246 2199 ntBASIC18.21■□□□□ 0.51
NEDD4P46934 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NEDD4P46934 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NEDD4P46934 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
NEDD4P46934 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
NEDD4P46934 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NEDD4P46934 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.21■□□□□ 0.51
NEDD4P46934 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
NEDD4P46934 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.21■□□□□ 0.51
NEDD4P46934 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.21■□□□□ 0.51
NEDD4P46934 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
NEDD4P46934 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
NEDD4P46934 AL162726.2-201ENST00000438986 1017 ntBASIC18.21■□□□□ 0.51
NEDD4P46934 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.21■□□□□ 0.51
NEDD4P46934 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
NEDD4P46934 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
NEDD4P46934 AP001582.1-201ENST00000525856 295 ntBASIC18.21■□□□□ 0.51
NEDD4P46934 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.21■□□□□ 0.51
NEDD4P46934 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC18.21■□□□□ 0.51
NEDD4P46934 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.21■□□□□ 0.51
NEDD4P46934 AC093813.1-201ENST00000605066 256 ntBASIC18.21■□□□□ 0.51
NEDD4P46934 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC18.21■□□□□ 0.51
NEDD4P46934 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
NEDD4P46934 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NEDD4P46934 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NEDD4P46934 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.2■□□□□ 0.5
NEDD4P46934 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
NEDD4P46934 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
NEDD4P46934 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NEDD4P46934 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC18.2■□□□□ 0.5
NEDD4P46934 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NEDD4P46934 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NEDD4P46934 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NEDD4P46934 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC18.2■□□□□ 0.5
NEDD4P46934 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NEDD4P46934 AL513477.1-201ENST00000602865 2407 ntBASIC18.2■□□□□ 0.5
NEDD4P46934 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NEDD4P46934 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NEDD4P46934 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
NEDD4P46934 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NEDD4P46934 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NEDD4P46934 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC18.2■□□□□ 0.5
NEDD4P46934 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.2■□□□□ 0.5
NEDD4P46934 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NEDD4P46934 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NEDD4P46934 AL512384.1-201ENST00000406683 331 ntBASIC18.2■□□□□ 0.5
NEDD4P46934 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
NEDD4P46934 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.2■□□□□ 0.5
NEDD4P46934 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.2■□□□□ 0.5
NEDD4P46934 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NEDD4P46934 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NEDD4P46934 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.2■□□□□ 0.5
NEDD4P46934 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.2■□□□□ 0.5
NEDD4P46934 MIR5189-201ENST00000577370 114 ntBASIC18.2■□□□□ 0.5
NEDD4P46934 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.2■□□□□ 0.5
NEDD4P46934 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.2■□□□□ 0.5
NEDD4P46934 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.2■□□□□ 0.5
NEDD4P46934 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.2■□□□□ 0.5
NEDD4P46934 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms