Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.2■□□□□ 0.18
MMP13P45452 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP13P45452 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.2■□□□□ 0.18
MMP13P45452 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.2■□□□□ 0.18
MMP13P45452 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MMP13P45452 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP13P45452 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
MMP13P45452 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP13P45452 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MMP13P45452 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP13P45452 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MMP13P45452 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.2■□□□□ 0.18
MMP13P45452 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MMP13P45452 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.2■□□□□ 0.18
MMP13P45452 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.2■□□□□ 0.18
MMP13P45452 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MMP13P45452 MIR6069-201ENST00000620069 79 ntBASIC16.2■□□□□ 0.18
MMP13P45452 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.2■□□□□ 0.18
MMP13P45452 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
MMP13P45452 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC16.2■□□□□ 0.18
MMP13P45452 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
MMP13P45452 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP13P45452 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
MMP13P45452 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
MMP13P45452 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.2■□□□□ 0.18
MMP13P45452 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.2■□□□□ 0.18
MMP13P45452 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP13P45452 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP13P45452 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MMP13P45452 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MMP13P45452 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP13P45452 AJ011931.1-201ENST00000618749 2492 ntBASIC16.2■□□□□ 0.18
MMP13P45452 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
MMP13P45452 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.2■□□□□ 0.18
MMP13P45452 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP13P45452 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP13P45452 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.19■□□□□ 0.18
MMP13P45452 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MMP13P45452 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.19■□□□□ 0.18
MMP13P45452 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP13P45452 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.19■□□□□ 0.18
MMP13P45452 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MMP13P45452 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MMP13P45452 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC16.19■□□□□ 0.18
MMP13P45452 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
MMP13P45452 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP13P45452 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.19■□□□□ 0.18
MMP13P45452 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
MMP13P45452 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.19■□□□□ 0.18
MMP13P45452 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP13P45452 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP13P45452 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP13P45452 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.19■□□□□ 0.18
MMP13P45452 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.19■□□□□ 0.18
MMP13P45452 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP13P45452 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.19■□□□□ 0.18
MMP13P45452 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP13P45452 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
MMP13P45452 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.19■□□□□ 0.18
MMP13P45452 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.19■□□□□ 0.18
MMP13P45452 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.19■□□□□ 0.18
MMP13P45452 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MMP13P45452 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.19■□□□□ 0.18
MMP13P45452 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP13P45452 HNRNPUP1-201ENST00000554987 333 ntBASIC16.19■□□□□ 0.18
MMP13P45452 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.19■□□□□ 0.18
MMP13P45452 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MMP13P45452 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.19■□□□□ 0.18
MMP13P45452 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP13P45452 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
MMP13P45452 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.19■□□□□ 0.18
MMP13P45452 AL033527.5-202ENST00000641632 1098 ntBASIC16.19■□□□□ 0.18
MMP13P45452 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP13P45452 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MMP13P45452 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP13P45452 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP13P45452 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP13P45452 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP13P45452 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MMP13P45452 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.19■□□□□ 0.18
MMP13P45452 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MMP13P45452 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
MMP13P45452 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP13P45452 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP13P45452 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP13P45452 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP13P45452 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP13P45452 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP13P45452 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP13P45452 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP13P45452 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP13P45452 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP13P45452 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP13P45452 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP13P45452 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP13P45452 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
MMP13P45452 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MMP13P45452 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
MMP13P45452 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP13P45452 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms