Protein–RNA interactions for Protein: P35609

ACTN2, Alpha-actinin-2, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN2P35609 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ACTN2P35609 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ACTN2P35609 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ACTN2P35609 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.72■□□□□ 0.27
ACTN2P35609 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
ACTN2P35609 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.72■□□□□ 0.27
ACTN2P35609 TSEN15P1-201ENST00000423257 515 ntBASIC16.72■□□□□ 0.27
ACTN2P35609 ACTG1P14-201ENST00000446382 1122 ntBASIC16.72■□□□□ 0.27
ACTN2P35609 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.72■□□□□ 0.27
ACTN2P35609 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.72■□□□□ 0.27
ACTN2P35609 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ACTN2P35609 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.72■□□□□ 0.27
ACTN2P35609 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
ACTN2P35609 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.72■□□□□ 0.27
ACTN2P35609 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.72■□□□□ 0.27
ACTN2P35609 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.72■□□□□ 0.27
ACTN2P35609 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.72■□□□□ 0.27
ACTN2P35609 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.72■□□□□ 0.27
ACTN2P35609 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.72■□□□□ 0.27
ACTN2P35609 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ACTN2P35609 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
ACTN2P35609 REXO1L2P-201ENST00000425429 2069 ntBASIC16.72■□□□□ 0.27
ACTN2P35609 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ACTN2P35609 SBF1P1-201ENST00000444527 5631 ntBASIC16.72■□□□□ 0.27
ACTN2P35609 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ACTN2P35609 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
ACTN2P35609 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ACTN2P35609 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ACTN2P35609 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ACTN2P35609 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
ACTN2P35609 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ACTN2P35609 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ACTN2P35609 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.72■□□□□ 0.27
ACTN2P35609 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ACTN2P35609 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ACTN2P35609 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ACTN2P35609 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ACTN2P35609 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ACTN2P35609 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ACTN2P35609 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.72■□□□□ 0.27
ACTN2P35609 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
ACTN2P35609 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.71■□□□□ 0.27
ACTN2P35609 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ACTN2P35609 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ACTN2P35609 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.71■□□□□ 0.27
ACTN2P35609 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ACTN2P35609 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ACTN2P35609 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ACTN2P35609 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ACTN2P35609 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ACTN2P35609 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC16.71■□□□□ 0.27
ACTN2P35609 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.71■□□□□ 0.27
ACTN2P35609 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ACTN2P35609 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.71■□□□□ 0.27
ACTN2P35609 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ACTN2P35609 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ACTN2P35609 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ACTN2P35609 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ACTN2P35609 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ACTN2P35609 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.71■□□□□ 0.27
ACTN2P35609 AC092474.2-201ENST00000424288 719 ntBASIC16.71■□□□□ 0.27
ACTN2P35609 AC140658.5-201ENST00000438532 169 ntBASIC16.71■□□□□ 0.27
ACTN2P35609 AC245100.5-201ENST00000452108 331 ntBASIC16.71■□□□□ 0.27
ACTN2P35609 AP000344.2-201ENST00000512987 629 ntBASIC16.71■□□□□ 0.27
ACTN2P35609 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
ACTN2P35609 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ACTN2P35609 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.71■□□□□ 0.27
ACTN2P35609 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.71■□□□□ 0.27
ACTN2P35609 AL096865.1-201ENST00000606796 927 ntBASIC16.71■□□□□ 0.27
ACTN2P35609 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.71■□□□□ 0.27
ACTN2P35609 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
ACTN2P35609 AL161645.1-201ENST00000622716 1255 ntBASIC16.71■□□□□ 0.27
ACTN2P35609 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ACTN2P35609 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ACTN2P35609 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
ACTN2P35609 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ACTN2P35609 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.71■□□□□ 0.27
ACTN2P35609 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
ACTN2P35609 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ACTN2P35609 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
ACTN2P35609 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ACTN2P35609 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.71■□□□□ 0.27
ACTN2P35609 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ACTN2P35609 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ACTN2P35609 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.26
ACTN2P35609 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
ACTN2P35609 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
ACTN2P35609 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.71■□□□□ 0.26
ACTN2P35609 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.7■□□□□ 0.26
ACTN2P35609 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ACTN2P35609 BCAR1-209ENST00000546196 1340 ntBASIC16.7■□□□□ 0.26
ACTN2P35609 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.7■□□□□ 0.26
ACTN2P35609 BEND3P1-201ENST00000421591 1944 ntBASIC16.7■□□□□ 0.26
ACTN2P35609 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
ACTN2P35609 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.7■□□□□ 0.26
ACTN2P35609 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ACTN2P35609 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.7■□□□□ 0.26
ACTN2P35609 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ACTN2P35609 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
ACTN2P35609 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms