Protein–RNA interactions for Protein: P30532

CHRNA5, Neuronal acetylcholine receptor subunit alpha-5, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5P30532 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNA5P30532 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNA5P30532 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNA5P30532 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNA5P30532 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNA5P30532 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNA5P30532 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNA5P30532 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNA5P30532 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.78■□□□□ 0.6
CHRNA5P30532 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNA5P30532 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNA5P30532 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNA5P30532 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNA5P30532 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
CHRNA5P30532 AL627231.1-201ENST00000394467 1125 ntBASIC18.78■□□□□ 0.6
CHRNA5P30532 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNA5P30532 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNA5P30532 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CHRNA5P30532 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC18.78■□□□□ 0.6
CHRNA5P30532 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNA5P30532 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNA5P30532 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.78■□□□□ 0.6
CHRNA5P30532 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNA5P30532 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNA5P30532 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNA5P30532 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNA5P30532 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNA5P30532 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNA5P30532 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNA5P30532 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.78■□□□□ 0.6
CHRNA5P30532 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNA5P30532 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNA5P30532 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNA5P30532 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA5P30532 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA5P30532 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA5P30532 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA5P30532 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA5P30532 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA5P30532 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CHRNA5P30532 AC090340.1-201ENST00000620778 4980 ntBASIC18.77■□□□□ 0.6
CHRNA5P30532 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA5P30532 AC009093.2-202ENST00000620513 2079 ntBASIC18.77■□□□□ 0.6
CHRNA5P30532 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA5P30532 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA5P30532 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CHRNA5P30532 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA5P30532 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA5P30532 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA5P30532 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA5P30532 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC18.77■□□□□ 0.6
CHRNA5P30532 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC18.77■□□□□ 0.6
CHRNA5P30532 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA5P30532 HLA-K-203ENST00000430151 1046 ntBASIC18.77■□□□□ 0.6
CHRNA5P30532 CTBP2P4-201ENST00000513884 920 ntBASIC18.77■□□□□ 0.6
CHRNA5P30532 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA5P30532 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA5P30532 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC18.77■□□□□ 0.6
CHRNA5P30532 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC18.77■□□□□ 0.6
CHRNA5P30532 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA5P30532 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC18.77■□□□□ 0.6
CHRNA5P30532 AL132994.2-201ENST00000603120 687 ntBASIC18.77■□□□□ 0.6
CHRNA5P30532 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
CHRNA5P30532 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CHRNA5P30532 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA5P30532 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA5P30532 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA5P30532 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC18.77■□□□□ 0.6
CHRNA5P30532 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA5P30532 AC124067.4-201ENST00000519691 2379 ntBASIC18.77■□□□□ 0.6
CHRNA5P30532 INE2-201ENST00000630399 1874 ntBASIC18.77■□□□□ 0.6
CHRNA5P30532 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHRNA5P30532 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHRNA5P30532 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHRNA5P30532 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHRNA5P30532 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
CHRNA5P30532 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHRNA5P30532 REXO1L5P-201ENST00000622260 2098 ntBASIC18.77■□□□□ 0.59
CHRNA5P30532 AC084364.1-201ENST00000551967 1556 ntBASIC18.76■□□□□ 0.59
CHRNA5P30532 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.76■□□□□ 0.59
CHRNA5P30532 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA5P30532 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA5P30532 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.76■□□□□ 0.59
CHRNA5P30532 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA5P30532 AP000593.2-201ENST00000542775 1433 ntBASIC18.76■□□□□ 0.59
CHRNA5P30532 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CHRNA5P30532 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.76■□□□□ 0.59
CHRNA5P30532 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CHRNA5P30532 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA5P30532 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CHRNA5P30532 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA5P30532 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA5P30532 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA5P30532 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA5P30532 OR2K2-202ENST00000374428 1038 ntBASIC18.76■□□□□ 0.59
CHRNA5P30532 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA5P30532 VDAC1P1-201ENST00000439229 848 ntBASIC18.76■□□□□ 0.59
CHRNA5P30532 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC18.76■□□□□ 0.59
CHRNA5P30532 AC026434.2-201ENST00000506094 1078 ntBASIC18.76■□□□□ 0.59
CHRNA5P30532 AC009779.1-201ENST00000551138 283 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms