Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
PTPN6P29350 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.79□□□□□ -0.04
PTPN6P29350 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN6P29350 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN6P29350 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN6P29350 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN6P29350 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN6P29350 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN6P29350 AC026748.1-201ENST00000624349 3251 ntBASIC14.79□□□□□ -0.04
PTPN6P29350 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN6P29350 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN6P29350 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN6P29350 CICP11-201ENST00000434745 2827 ntBASIC14.79□□□□□ -0.04
PTPN6P29350 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PTPN6P29350 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN6P29350 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.79□□□□□ -0.04
PTPN6P29350 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN6P29350 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTPN6P29350 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
PTPN6P29350 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.78□□□□□ -0.04
PTPN6P29350 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PTPN6P29350 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.78□□□□□ -0.04
PTPN6P29350 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
PTPN6P29350 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTPN6P29350 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
PTPN6P29350 AL035456.1-201ENST00000456064 1369 ntBASIC14.78□□□□□ -0.04
PTPN6P29350 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTPN6P29350 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
PTPN6P29350 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.78□□□□□ -0.04
PTPN6P29350 TREML5P-201ENST00000421694 576 ntBASIC14.78□□□□□ -0.04
PTPN6P29350 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.78□□□□□ -0.04
PTPN6P29350 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.78□□□□□ -0.04
PTPN6P29350 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
PTPN6P29350 AC069120.2-201ENST00000524091 540 ntBASIC14.78□□□□□ -0.04
PTPN6P29350 AC005498.2-205ENST00000593218 784 ntBASIC14.78□□□□□ -0.04
PTPN6P29350 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.78□□□□□ -0.04
PTPN6P29350 AL390955.2-201ENST00000603032 514 ntBASIC14.78□□□□□ -0.04
PTPN6P29350 AL158211.3-201ENST00000607385 239 ntBASIC14.78□□□□□ -0.04
PTPN6P29350 AL133215.2-201ENST00000609242 977 ntBASIC14.78□□□□□ -0.04
PTPN6P29350 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.78□□□□□ -0.04
PTPN6P29350 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTPN6P29350 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTPN6P29350 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTPN6P29350 SNX18-202ENST00000343017 3140 ntBASIC14.78□□□□□ -0.04
PTPN6P29350 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTPN6P29350 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTPN6P29350 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.78□□□□□ -0.04
PTPN6P29350 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTPN6P29350 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PTPN6P29350 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PTPN6P29350 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTPN6P29350 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTPN6P29350 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTPN6P29350 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTPN6P29350 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.78□□□□□ -0.04
PTPN6P29350 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PTPN6P29350 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.77□□□□□ -0.04
PTPN6P29350 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.77□□□□□ -0.04
PTPN6P29350 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PTPN6P29350 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.77□□□□□ -0.04
PTPN6P29350 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
PTPN6P29350 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
PTPN6P29350 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PTPN6P29350 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
PTPN6P29350 FO538757.1-201ENST00000623083 1397 ntBASIC14.77□□□□□ -0.04
PTPN6P29350 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PTPN6P29350 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PTPN6P29350 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
PTPN6P29350 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PTPN6P29350 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
PTPN6P29350 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PTPN6P29350 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PTPN6P29350 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
PTPN6P29350 FO393414.2-201ENST00000405153 598 ntBASIC14.77□□□□□ -0.05
PTPN6P29350 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PTPN6P29350 AC055876.3-201ENST00000431496 288 ntBASIC14.77□□□□□ -0.05
PTPN6P29350 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.77□□□□□ -0.05
PTPN6P29350 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.77□□□□□ -0.05
PTPN6P29350 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.77□□□□□ -0.05
PTPN6P29350 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.77□□□□□ -0.05
PTPN6P29350 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PTPN6P29350 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
PTPN6P29350 AC138649.4-201ENST00000612222 287 ntBASIC14.77□□□□□ -0.05
PTPN6P29350 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
PTPN6P29350 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PTPN6P29350 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
PTPN6P29350 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.77□□□□□ -0.05
PTPN6P29350 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PTPN6P29350 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PTPN6P29350 NORAD-201ENST00000565493 5339 ntBASIC14.77□□□□□ -0.05
PTPN6P29350 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PTPN6P29350 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.77□□□□□ -0.05
PTPN6P29350 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PTPN6P29350 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.77□□□□□ -0.05
PTPN6P29350 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.77□□□□□ -0.05
PTPN6P29350 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.77□□□□□ -0.05
PTPN6P29350 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.77□□□□□ -0.05
PTPN6P29350 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.77□□□□□ -0.05
PTPN6P29350 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
PTPN6P29350 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms