Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.85□□□□□ -1.311e-8■■□□□ 14.5
U2AF2P26368 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.96□□□□□ -1.781e-8■■□□□ 14.5
U2AF2P26368 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.79□□□□□ -1.487e-8■■□□□ 14.5
U2AF2P26368 BCL2L2-204ENST00000556599 548 ntTSL 320.93■□□□□ 0.943e-59■■□□□ 14.5
U2AF2P26368 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.02■□□□□ 0.325e-14■■□□□ 14.5
U2AF2P26368 SS18L1-201ENST00000331758 4493 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.715e-14■■□□□ 14.5
U2AF2P26368 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.163e-7■■□□□ 14.5
U2AF2P26368 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.843e-7■■□□□ 14.5
U2AF2P26368 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.763e-7■■□□□ 14.5
U2AF2P26368 ARID1B-201ENST00000319584 2199 ntTSL 214.77□□□□□ -0.043e-7■■□□□ 14.5
U2AF2P26368 ARID1B-205ENST00000414678 6528 ntAPPRIS ALT2 TSL 510.18□□□□□ -0.783e-7■■□□□ 14.5
U2AF2P26368 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC14.64□□□□□ -0.073e-7■■□□□ 14.5
U2AF2P26368 METTL3-205ENST00000536201 1592 ntTSL 214.64□□□□□ -0.077e-7■■□□□ 14.5
U2AF2P26368 FNIP1-203ENST00000510461 3845 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.453e-7■■□□□ 14.5
U2AF2P26368 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.84□□□□□ -1.313e-7■■□□□ 14.5
U2AF2P26368 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.43e-7■■□□□ 14.5
U2AF2P26368 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 14e-6■■□□□ 14.5
U2AF2P26368 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.7■□□□□ 0.744e-6■■□□□ 14.5
U2AF2P26368 UXT-205ENST00000485641 627 ntTSL 317.86■□□□□ 0.454e-6■■□□□ 14.5
U2AF2P26368 UXT-204ENST00000460840 476 ntTSL 25□□□□□ -1.614e-6■■□□□ 14.5
U2AF2P26368 ANAPC4-209ENST00000507925 731 ntTSL 33.23□□□□□ -1.894e-6■■□□□ 14.5
U2AF2P26368 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.09■□□□□ 0.332e-8■■□□□ 14.5
U2AF2P26368 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.193e-7■■□□□ 14.5
U2AF2P26368 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.753e-7■■□□□ 14.5
U2AF2P26368 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.02■□□□□ 0.483e-7■■□□□ 14.5
U2AF2P26368 LSM12-203ENST00000590563 559 ntTSL 214.62□□□□□ -0.073e-7■■□□□ 14.5
U2AF2P26368 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.353e-7■■□□□ 14.5
U2AF2P26368 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.993e-7■■□□□ 14.5
U2AF2P26368 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.13■□□□□ 0.653e-7■■□□□ 14.5
U2AF2P26368 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.413e-7■■□□□ 14.5
U2AF2P26368 SPATS2L-208ENST00000409718 2648 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.113e-7■■□□□ 14.5
U2AF2P26368 SPATS2L-206ENST00000409385 2320 ntTSL 2 BASIC12.67□□□□□ -0.383e-7■■□□□ 14.5
U2AF2P26368 SPATS2L-207ENST00000409397 920 ntTSL 39.92□□□□□ -0.823e-7■■□□□ 14.5
U2AF2P26368 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.883e-7■■□□□ 14.5
U2AF2P26368 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC9.38□□□□□ -0.913e-7■■□□□ 14.5
U2AF2P26368 PPP6R3-223ENST00000531432 589 ntTSL 34.4□□□□□ -1.713e-7■■□□□ 14.5
U2AF2P26368 SAT1-207ENST00000474223 1033 ntTSL 26.33□□□□□ -1.42e-37■■□□□ 14.5
U2AF2P26368 SAT1-205ENST00000462639 826 ntTSL 22.51□□□□□ -2.012e-37■■□□□ 14.5
U2AF2P26368 AVL9-207ENST00000485228 489 ntTSL 521.03■□□□□ 0.967e-7■■□□□ 14.5
U2AF2P26368 STAU1-208ENST00000437404 1085 ntTSL 1 (best)22.79■■□□□ 1.243e-7■■□□□ 14.5
U2AF2P26368 ARHGAP17-210ENST00000572314 4966 ntTSL 210.25□□□□□ -0.776e-7■■□□□ 14.5
U2AF2P26368 TFB1M-203ENST00000468889 621 ntTSL 34.92□□□□□ -1.625e-8■■□□□ 14.5
U2AF2P26368 FNDC3B-202ENST00000415807 5083 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.38e-8■■□□□ 14.5
U2AF2P26368 FNDC3B-201ENST00000336824 7904 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.778e-8■■□□□ 14.5
U2AF2P26368 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.032e-16■■□□□ 14.5
U2AF2P26368 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.45■■□□□ 1.022e-16■■□□□ 14.5
U2AF2P26368 DDX18-202ENST00000415038 644 ntTSL 54.12□□□□□ -1.752e-7■■□□□ 14.5
U2AF2P26368 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.112e-7■■□□□ 14.5
U2AF2P26368 ATP2A1-205ENST00000563975 545 ntTSL 211.79□□□□□ -0.521e-6■■□□□ 14.4
U2AF2P26368 KRIT1-215ENST00000452773 665 ntTSL 221.38■■□□□ 1.011e-9■■□□□ 14.4
U2AF2P26368 KRIT1-224ENST00000489087 512 ntTSL 421.1■□□□□ 0.971e-9■■□□□ 14.4
U2AF2P26368 KRIT1-219ENST00000466166 545 ntTSL 413.39□□□□□ -0.271e-9■■□□□ 14.4
U2AF2P26368 KRIT1-213ENST00000444960 783 ntTSL 411.33□□□□□ -0.61e-9■■□□□ 14.4
U2AF2P26368 KRIT1-206ENST00000413688 551 ntTSL 410.36□□□□□ -0.751e-9■■□□□ 14.4
U2AF2P26368 KRIT1-208ENST00000425073 546 ntTSL 49.88□□□□□ -0.831e-9■■□□□ 14.4
U2AF2P26368 KRIT1-218ENST00000458493 507 ntTSL 43□□□□□ -1.931e-9■■□□□ 14.4
U2AF2P26368 KRIT1-207ENST00000422347 483 ntTSL 52.3□□□□□ -2.041e-9■■□□□ 14.4
U2AF2P26368 KRIT1-209ENST00000425919 572 ntTSL 52.3□□□□□ -2.041e-9■■□□□ 14.4
U2AF2P26368 PABPC1L-208ENST00000372826 854 ntTSL 511.92□□□□□ -0.56e-10■■□□□ 14.4
U2AF2P26368 AL139353.1-201ENST00000549185 3860 ntTSL 211.27□□□□□ -0.617e-7■■□□□ 14.4
U2AF2P26368 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.472e-8■■□□□ 14.4
U2AF2P26368 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.162e-8■■□□□ 14.4
U2AF2P26368 YBX3-213ENST00000542641 669 ntTSL 413.23□□□□□ -0.292e-8■■□□□ 14.4
U2AF2P26368 YBX3-208ENST00000540447 6393 ntTSL 210.31□□□□□ -0.762e-8■■□□□ 14.4
U2AF2P26368 RBM6-206ENST00000433811 582 ntTSL 316.25■□□□□ 0.191e-10■■□□□ 14.4
U2AF2P26368 RBM39-220ENST00000455343 441 ntTSL 53.97□□□□□ -1.776e-13■■□□□ 14.4
U2AF2P26368 FAU-208ENST00000531357 1484 nt22.77■■□□□ 1.241e-8■■□□□ 14.4
U2AF2P26368 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.981e-8■■□□□ 14.4
U2AF2P26368 MORF4L1-220ENST00000559930 678 ntTSL 419.5■□□□□ 0.717e-12■■□□□ 14.4
U2AF2P26368 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.671e-8■■□□□ 14.4
U2AF2P26368 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.451e-8■■□□□ 14.4
U2AF2P26368 FAU-204ENST00000526555 507 ntTSL 516.19■□□□□ 0.181e-8■■□□□ 14.4
U2AF2P26368 FAU-201ENST00000279259 461 ntTSL 2 BASIC13.66□□□□□ -0.221e-8■■□□□ 14.4
U2AF2P26368 FAU-206ENST00000529259 1125 ntTSL 1 (best) BASIC13.37□□□□□ -0.271e-8■■□□□ 14.4
U2AF2P26368 MORF4L1-210ENST00000558893 1209 ntTSL 1 (best)12.74□□□□□ -0.377e-12■■□□□ 14.4
U2AF2P26368 PRRC2A-212ENST00000487089 732 ntTSL 29.29□□□□□ -0.921e-8■■□□□ 14.4
U2AF2P26368 MORF4L1-213ENST00000559244 582 ntTSL 37.12□□□□□ -1.277e-12■■□□□ 14.4
U2AF2P26368 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.9□□□□□ -1.31e-8■■□□□ 14.4
U2AF2P26368 MORF4L1-206ENST00000558522 1074 ntTSL 25□□□□□ -1.617e-12■■□□□ 14.4
U2AF2P26368 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.74■■□□□ 1.075e-8■■□□□ 14.4
U2AF2P26368 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.65e-8■■□□□ 14.4
U2AF2P26368 ASXL1-211ENST00000619344 550 ntTSL 515.92■□□□□ 0.143e-21■■□□□ 14.4
U2AF2P26368 ASXL1-207ENST00000553345 809 ntTSL 512.69□□□□□ -0.383e-21■■□□□ 14.4
U2AF2P26368 ASXL1-209ENST00000555564 658 ntTSL 411.34□□□□□ -0.593e-21■■□□□ 14.4
U2AF2P26368 MTDH-204ENST00000521933 565 ntTSL 53.99□□□□□ -1.775e-8■■□□□ 14.4
U2AF2P26368 MTDH-202ENST00000519293 629 ntTSL 33.3□□□□□ -1.885e-8■■□□□ 14.4
U2AF2P26368 SLC35A3-212ENST00000638929 3035 ntTSL 220.16■□□□□ 0.822e-6■■□□□ 14.4
U2AF2P26368 MBD5-208ENST00000478804 592 ntTSL 52.14□□□□□ -2.076e-7■■□□□ 14.4
U2AF2P26368 MBD5-218ENST00000636620 475 ntTSL 50.92□□□□□ -2.266e-7■■□□□ 14.4
U2AF2P26368 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.88□□□□□ -1.478e-8■■□□□ 14.4
U2AF2P26368 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC26.12■■□□□ 1.778e-12■■□□□ 14.4
U2AF2P26368 TFR2-204ENST00000462090 1844 ntTSL 521.64■■□□□ 1.062e-6■■□□□ 14.4
U2AF2P26368 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.21■□□□□ 0.998e-12■■□□□ 14.4
U2AF2P26368 TFR2-212ENST00000476304 2421 ntTSL 519.99■□□□□ 0.792e-6■■□□□ 14.4
U2AF2P26368 TFR2-213ENST00000490084 2196 ntTSL 219.86■□□□□ 0.772e-6■■□□□ 14.4
U2AF2P26368 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC19.57■□□□□ 0.722e-6■■□□□ 14.4
U2AF2P26368 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.312e-6■■□□□ 14.4
U2AF2P26368 TFR2-206ENST00000465294 2763 ntTSL 216.64■□□□□ 0.252e-6■■□□□ 14.4
U2AF2P26368 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.22e-6■■□□□ 14.4
U2AF2P26368 FAR2P4-201ENST00000416266 2210 ntTSL 210.9□□□□□ -0.668e-12■■□□□ 14.4
Retrieved 100 of 36,523 protein–RNA pairs in 198.9 ms