RNA–Protein interactions for RNA: ENST00000638929.1

SLC35A3-212, Transcript of solute carrier family 35 member A3, humanhuman

TSL 2

Gene SLC35A3, Length 3,035 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC35A3-212ENST00000638929 NISCHQ9Y2I1 1504 aa33.94■■■■□ 3.02
SLC35A3-212ENST00000638929 SHROOM4Q9ULL8 1493 aa30.41■■■□□ 2.46
SLC35A3-212ENST00000638929 SUPT5HO00267 1087 aaKnown RBP29.93■■■□□ 2.38
SLC35A3-212ENST00000638929 DCAF8L2P0C7V8 631 aa29.55■■■□□ 2.32
SLC35A3-212ENST00000638929 CHIC1Q5VXU3 224 aa28.67■■■□□ 2.18
SLC35A3-212ENST00000638929 MYO15BQ96JP2 1530 aa28.67■■■□□ 2.18
SLC35A3-212ENST00000638929 ZCCHC6Q5VYS8 1495 aaKnown RBP28.65■■■□□ 2.18
SLC35A3-212ENST00000638929 CCDC180Q9P1Z9 1646 aa28.57■■■□□ 2.16
SLC35A3-212ENST00000638929 PCGF6Q9BYE7 350 aa28.54■■■□□ 2.16
SLC35A3-212ENST00000638929 LOC105371045A0A1W2PR82 267 aa28.34■■■□□ 2.13
SLC35A3-212ENST00000638929 PPARGC1BQ86YN6 1023 aaKnown RBP28.28■■■□□ 2.12
SLC35A3-212ENST00000638929 HRCP23327 699 aa28.21■■■□□ 2.11
SLC35A3-212ENST00000638929 EHMT2Q96KQ7 1210 aa28.11■■■□□ 2.09
SLC35A3-212ENST00000638929 FAM9AQ8IZU1 332 aaPredicted RBP27.86■■■□□ 2.05
SLC35A3-212ENST00000638929 TRIM41Q8WV44 630 aa27.47■■□□□ 1.99
SLC35A3-212ENST00000638929 DCAF1Q9Y4B6 1507 aa27.39■■□□□ 1.98
SLC35A3-212ENST00000638929 SCRIBQ14160 1630 aa27.38■■□□□ 1.97
SLC35A3-212ENST00000638929 TRIM26Q12899 539 aaPredicted RBP27.36■■□□□ 1.97
SLC35A3-212ENST00000638929 RSF1Q96T23 1441 aaPredicted RBP27.21■■□□□ 1.95
SLC35A3-212ENST00000638929 TTBK1Q5TCY1 1321 aaPredicted RBP27.17■■□□□ 1.94
SLC35A3-212ENST00000638929 ABCC9O60706 1549 aa27.07■■□□□ 1.92
SLC35A3-212ENST00000638929 RB1CC1Q8TDY2 1594 aa27.04■■□□□ 1.92
SLC35A3-212ENST00000638929 CECR2Q9BXF3 1484 aa26.93■■□□□ 1.9
SLC35A3-212ENST00000638929 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.79■■□□□ 1.88
SLC35A3-212ENST00000638929 MROH2BQ7Z745 1585 aa26.68■■□□□ 1.86
SLC35A3-212ENST00000638929 ZEB1P37275 1124 aaPredicted RBP26.57■■□□□ 1.84
SLC35A3-212ENST00000638929 CCER1Q8TC90 406 aaPredicted RBP26.56■■□□□ 1.84
SLC35A3-212ENST00000638929 WIZO95785 1651 aa26.55■■□□□ 1.84
SLC35A3-212ENST00000638929 SCAF1Q9H7N4 1312 aaKnown RBP26.44■■□□□ 1.82
SLC35A3-212ENST00000638929 RANGAP1P46060 587 aaPredicted RBP26.37■■□□□ 1.81
SLC35A3-212ENST00000638929 PABPN1Q86U42 306 aaKnown RBP eCLIP26.34■■□□□ 1.81
SLC35A3-212ENST00000638929 ABCC8Q09428 1581 aa26.31■■□□□ 1.8
SLC35A3-212ENST00000638929 UBTFP17480 764 aaKnown RBP26.3■■□□□ 1.8
SLC35A3-212ENST00000638929 NACADO15069 1562 aa26.27■■□□□ 1.8
SLC35A3-212ENST00000638929 CCDC88BA6NC98 1476 aa26.21■■□□□ 1.79
SLC35A3-212ENST00000638929 SOGA1O94964 1423 aa26.16■■□□□ 1.78
SLC35A3-212ENST00000638929 NEUROD1Q13562 356 aa26.09■■□□□ 1.77
SLC35A3-212ENST00000638929 RUSC2Q8N2Y8 1516 aa26.07■■□□□ 1.76
SLC35A3-212ENST00000638929 HNRNPUL2Q1KMD3 747 aaKnown RBP26.06■■□□□ 1.76
SLC35A3-212ENST00000638929 DIEXFQ68CQ4 756 aaKnown RBP26.05■■□□□ 1.76
SLC35A3-212ENST00000638929 YTHDC1Q96MU7 727 aaKnown RBP26.04■■□□□ 1.76
SLC35A3-212ENST00000638929 CEP162Q5TB80 1403 aa25.99■■□□□ 1.75
SLC35A3-212ENST00000638929 BAZ1AQ9NRL2 1556 aaPredicted RBP25.98■■□□□ 1.75
SLC35A3-212ENST00000638929 CSRNP3Q8WYN3 585 aa25.96■■□□□ 1.75
SLC35A3-212ENST00000638929 GTF3C3Q9Y5Q9 886 aa25.88■■□□□ 1.73
SLC35A3-212ENST00000638929 ACIN1Q9UKV3 1341 aaKnown RBP25.88■■□□□ 1.73
SLC35A3-212ENST00000638929 EIF4G1Q04637 1599 aaKnown RBP25.79■■□□□ 1.72
SLC35A3-212ENST00000638929 TOP2AP11388 1531 aaKnown RBP25.77■■□□□ 1.72
SLC35A3-212ENST00000638929 SMARCA2P51531 1590 aa25.76■■□□□ 1.71
SLC35A3-212ENST00000638929 SMARCA4P51532 1647 aa25.75■■□□□ 1.71
SLC35A3-212ENST00000638929 TNIKQ9UKE5 1360 aa25.68■■□□□ 1.7
SLC35A3-212ENST00000638929 UNC13AQ9UPW8 1703 aa25.64■■□□□ 1.69
SLC35A3-212ENST00000638929 CENPBP07199 599 aaPredicted RBP25.63■■□□□ 1.69
SLC35A3-212ENST00000638929 ZNF316A6NFI3 1004 aaPredicted RBP25.6■■□□□ 1.69
SLC35A3-212ENST00000638929 APLP2Q06481 763 aa25.6■■□□□ 1.69
SLC35A3-212ENST00000638929 WRNQ14191 1432 aaPredicted RBP eCLIP25.59■■□□□ 1.69
SLC35A3-212ENST00000638929 MIER1Q8N108 512 aa25.56■■□□□ 1.68
SLC35A3-212ENST00000638929 GOLGA3Q08378 1498 aa25.51■■□□□ 1.67
SLC35A3-212ENST00000638929 ITGAEP38570 1179 aa25.48■■□□□ 1.67
SLC35A3-212ENST00000638929 CLIP1P30622 1438 aa25.47■■□□□ 1.67
SLC35A3-212ENST00000638929 PELP1Q8IZL8 1130 aaKnown RBP25.46■■□□□ 1.67
SLC35A3-212ENST00000638929 SYNJ1O43426 1573 aa25.39■■□□□ 1.66
SLC35A3-212ENST00000638929 RAPGEF2Q9Y4G8 1499 aa25.38■■□□□ 1.65
SLC35A3-212ENST00000638929 EEA1Q15075 1411 aa25.33■■□□□ 1.65
SLC35A3-212ENST00000638929 CEP164Q9UPV0 1460 aa25.28■■□□□ 1.64
SLC35A3-212ENST00000638929 KANK4Q5T7N3 995 aaPredicted RBP25.28■■□□□ 1.64
SLC35A3-212ENST00000638929 BICRAQ9NZM4 1560 aa25.27■■□□□ 1.64
SLC35A3-212ENST00000638929 BAZ1BQ9UIG0 1483 aaKnown RBP25.22■■□□□ 1.63
SLC35A3-212ENST00000638929 VPS8Q8N3P4 1428 aa25.2■■□□□ 1.62
SLC35A3-212ENST00000638929 ATAD2BQ9ULI0 1458 aa25.18■■□□□ 1.62
SLC35A3-212ENST00000638929 ATP1B4Q9UN42 357 aaPredicted RBP25.12■■□□□ 1.61
SLC35A3-212ENST00000638929 KIF21BO75037 1637 aa25.06■■□□□ 1.6
SLC35A3-212ENST00000638929 P3H3Q8IVL6 736 aa25.04■■□□□ 1.6
SLC35A3-212ENST00000638929 PEG3Q9GZU2 1588 aa25.01■■□□□ 1.59
SLC35A3-212ENST00000638929 KCNH8Q96L42 1107 aa24.95■■□□□ 1.58
SLC35A3-212ENST00000638929 DHX57Q6P158 1386 aaKnown RBP24.93■■□□□ 1.58
SLC35A3-212ENST00000638929 HIRIP3Q9BW71 556 aaPredicted RBP24.93■■□□□ 1.58
SLC35A3-212ENST00000638929 ARAP1Q96P48 1450 aa24.89■■□□□ 1.58
SLC35A3-212ENST00000638929 FAM50AQ14320 339 aaKnown RBP24.86■■□□□ 1.57
SLC35A3-212ENST00000638929 BCANQ96GW7 911 aa24.81■■□□□ 1.56
SLC35A3-212ENST00000638929 SIN3AQ96ST3 1273 aa24.79■■□□□ 1.56
SLC35A3-212ENST00000638929 TOP2BQ02880 1626 aa24.76■■□□□ 1.55
SLC35A3-212ENST00000638929 CUX1P39880 1505 aa24.73■■□□□ 1.55
SLC35A3-212ENST00000638929 PRXQ9BXM0 1461 aa24.73■■□□□ 1.55
SLC35A3-212ENST00000638929 KIF27Q86VH2 1401 aa24.71■■□□□ 1.55
SLC35A3-212ENST00000638929 DDX10Q13206 875 aaKnown RBP24.7■■□□□ 1.54
SLC35A3-212ENST00000638929 CCNB3Q8WWL7 1395 aa24.7■■□□□ 1.54
SLC35A3-212ENST00000638929 SUPT16HQ9Y5B9 1047 aaKnown RBP24.67■■□□□ 1.54
SLC35A3-212ENST00000638929 RAB3GAP2Q9H2M9 1393 aa24.64■■□□□ 1.53
SLC35A3-212ENST00000638929 ARHGAP35Q9NRY4 1499 aa24.64■■□□□ 1.53
SLC35A3-212ENST00000638929 CUX2O14529 1486 aa24.63■■□□□ 1.53
SLC35A3-212ENST00000638929 TRIM52Q96A61 297 aa24.52■■□□□ 1.52
SLC35A3-212ENST00000638929 IGF1RP08069 1367 aa24.52■■□□□ 1.52
SLC35A3-212ENST00000638929 RRBP1Q9P2E9 1410 aaKnown RBP24.51■■□□□ 1.51
SLC35A3-212ENST00000638929 ERICH3Q5RHP9 1530 aa24.5■■□□□ 1.51
SLC35A3-212ENST00000638929 PHLDB1Q86UU1 1377 aa24.5■■□□□ 1.51
SLC35A3-212ENST00000638929 BIVM-ERCC5R4GMW8 1640 aa24.5■■□□□ 1.51
SLC35A3-212ENST00000638929 ARID3CA6NKF2 412 aa24.48■■□□□ 1.51
SLC35A3-212ENST00000638929 CARMIL1Q5VZK9 1371 aa24.48■■□□□ 1.51
SLC35A3-212ENST00000638929 CLSPNQ9HAW4 1339 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms