RNA–Protein interactions for RNA: ENST00000519293.1

MTDH-202, Transcript of metadherin, humanhuman

TSL 3

Gene MTDH, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTDH-202ENST00000519293 AEBP2Q6ZN18 517 aaPredicted RBP30.07■■■□□ 2.4
MTDH-202ENST00000519293 CHIC1Q5VXU3 224 aa29.58■■■□□ 2.33
MTDH-202ENST00000519293 PHF23Q9BUL5 403 aaPredicted RBP26.04■■□□□ 1.76
MTDH-202ENST00000519293 SENP3Q9H4L4 574 aaPredicted RBP25.48■■□□□ 1.67
MTDH-202ENST00000519293 PLPPR3Q6T4P5 718 aa24.1■■□□□ 1.45
MTDH-202ENST00000519293 FOXD1Q16676 465 aa23.61■■□□□ 1.37
MTDH-202ENST00000519293 PPP6R1Q9UPN7 881 aa22.88■■□□□ 1.25
MTDH-202ENST00000519293 ADRA2BP18089 450 aa22.86■■□□□ 1.25
MTDH-202ENST00000519293 PIAS4Q8N2W9 510 aaPredicted RBP22.32■■□□□ 1.16
MTDH-202ENST00000519293 MSH5O43196 834 aa21.69■■□□□ 1.06
MTDH-202ENST00000519293 PPP4R3CPQ6ZMV5 832 aa21.26■□□□□ 0.99
MTDH-202ENST00000519293 KCNA4P22459 653 aa21.03■□□□□ 0.96
MTDH-202ENST00000519293 SCAF1Q9H7N4 1312 aaKnown RBP20.89■□□□□ 0.93
MTDH-202ENST00000519293 NCBP3Q53F19 620 aaKnown RBP20.74■□□□□ 0.91
MTDH-202ENST00000519293 MAPK8IP2Q13387 824 aaPredicted RBP20.66■□□□□ 0.9
MTDH-202ENST00000519293 CNKSR2Q8WXI2 1034 aa20.62■□□□□ 0.89
MTDH-202ENST00000519293 NPM3O75607 178 aaKnown RBP20.48■□□□□ 0.87
MTDH-202ENST00000519293 DMRT2Q9Y5R5 561 aa20.38■□□□□ 0.85
MTDH-202ENST00000519293 RNF216Q9NWF9 866 aaPredicted RBP20.17■□□□□ 0.82
MTDH-202ENST00000519293 HOXD11P31277 338 aaPredicted RBP20.05■□□□□ 0.8
MTDH-202ENST00000519293 SLC4A1APQ9BWU0 796 aaKnown RBP20.05■□□□□ 0.8
MTDH-202ENST00000519293 DNAJC5BQ9UF47 199 aa19.91■□□□□ 0.78
MTDH-202ENST00000519293 EHMT2Q96KQ7 1210 aa19.72■□□□□ 0.75
MTDH-202ENST00000519293 DCAF8L1A6NGE4 600 aa19.42■□□□□ 0.7
MTDH-202ENST00000519293 CSRNP3Q8WYN3 585 aa19.41■□□□□ 0.7
MTDH-202ENST00000519293 ZBTB22O15209 634 aa19.39■□□□□ 0.69
MTDH-202ENST00000519293 POTEDQ86YR6 584 aa19.37■□□□□ 0.69
MTDH-202ENST00000519293 FOXD4L1Q9NU39 408 aa19.3■□□□□ 0.68
MTDH-202ENST00000519293 SLC4A2P04920 1241 aa19.29■□□□□ 0.68
MTDH-202ENST00000519293 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.05■□□□□ 0.646e-10■■■□□ 17.4
MTDH-202ENST00000519293 MYCNP04198 464 aaPredicted RBP18.93■□□□□ 0.62
MTDH-202ENST00000519293 U3KPZ7 1027 aaPredicted RBP18.83■□□□□ 0.6
MTDH-202ENST00000519293 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.62■□□□□ 0.57
MTDH-202ENST00000519293 HNRNPUL2Q1KMD3 747 aaKnown RBP18.62■□□□□ 0.57
MTDH-202ENST00000519293 RNF39Q9H2S5 420 aa18.62■□□□□ 0.57
MTDH-202ENST00000519293 ATXN8OSP0DMR3 200 aa18.6■□□□□ 0.57
MTDH-202ENST00000519293 SAMD1Q6SPF0 538 aaPredicted RBP18.58■□□□□ 0.56
MTDH-202ENST00000519293 C1QBPQ07021 282 aaKnown RBP18.39■□□□□ 0.53
MTDH-202ENST00000519293 ATF5Q9Y2D1 282 aaPredicted RBP18.39■□□□□ 0.53
MTDH-202ENST00000519293 APLP2Q06481 763 aa18.38■□□□□ 0.53
MTDH-202ENST00000519293 SPINK5Q9NQ38 1064 aaPredicted RBP18.21■□□□□ 0.51
MTDH-202ENST00000519293 CAPN15O75808 1086 aa18.1■□□□□ 0.49
MTDH-202ENST00000519293 ZNF219Q9P2Y4 722 aaPredicted RBP18.1■□□□□ 0.49
MTDH-202ENST00000519293 TRHP20396 242 aaPredicted RBP18.06■□□□□ 0.48
MTDH-202ENST00000519293 CACNB1Q02641 598 aaPredicted RBP17.92■□□□□ 0.46
MTDH-202ENST00000519293 POLA2Q14181 598 aa17.82■□□□□ 0.44
MTDH-202ENST00000519293 ABCB7O75027 752 aa17.79■□□□□ 0.44
MTDH-202ENST00000519293 DSG3P32926 999 aa17.78■□□□□ 0.44
MTDH-202ENST00000519293 MKRN4PQ13434 485 aaPredicted RBP17.63■□□□□ 0.41
MTDH-202ENST00000519293 ZBTB12Q9Y330 459 aaPredicted RBP17.59■□□□□ 0.41
MTDH-202ENST00000519293 FBLN2P98095 1184 aa17.58■□□□□ 0.4
MTDH-202ENST00000519293 FKBP8Q14318 412 aa17.52■□□□□ 0.4
MTDH-202ENST00000519293 SPDYE4A6NLX3 237 aa17.3■□□□□ 0.36
MTDH-202ENST00000519293 OSCARQ8IYS5 282 aa17.26■□□□□ 0.35
MTDH-202ENST00000519293 SPDYE2BA6NHP3 402 aa17.13■□□□□ 0.33
MTDH-202ENST00000519293 SPDYE6P0CI01 402 aa17.13■□□□□ 0.33
MTDH-202ENST00000519293 SPDYE2Q495Y8 402 aa17.13■□□□□ 0.33
MTDH-202ENST00000519293 PROM2Q8N271 834 aa17.12■□□□□ 0.33
MTDH-202ENST00000519293 ZNF692Q9BU19 519 aaPredicted RBP17.05■□□□□ 0.32
MTDH-202ENST00000519293 SSUH2Q9Y2M2 353 aa17.05■□□□□ 0.32
MTDH-202ENST00000519293 RBM42Q9BTD8 480 aaKnown RBP16.93■□□□□ 0.3
MTDH-202ENST00000519293 PABPN1Q86U42 306 aaKnown RBP eCLIP16.85■□□□□ 0.29
MTDH-202ENST00000519293 FBXO3Q9UK99 471 aa16.83■□□□□ 0.28
MTDH-202ENST00000519293 AKT1S1Q96B36 256 aa16.77■□□□□ 0.28
MTDH-202ENST00000519293 VASPP50552 380 aaPredicted RBP16.64■□□□□ 0.25
MTDH-202ENST00000519293 STAG3Q9UJ98 1225 aa16.61■□□□□ 0.25
MTDH-202ENST00000519293 REM2Q8IYK8 340 aaPredicted RBP16.6■□□□□ 0.25
MTDH-202ENST00000519293 SPDYE1Q8NFV5 336 aaPredicted RBP16.56■□□□□ 0.24
MTDH-202ENST00000519293 PITPNM1O00562 1244 aa16.44■□□□□ 0.22
MTDH-202ENST00000519293 CLEC11AQ9Y240 323 aa16.43■□□□□ 0.22
MTDH-202ENST00000519293 IFNLR1Q8IU57 520 aaPredicted RBP16.41■□□□□ 0.22
MTDH-202ENST00000519293 AMER1Q5JTC6 1135 aaPredicted RBP16.37■□□□□ 0.21
MTDH-202ENST00000519293 PLCD3Q8N3E9 789 aa16.35■□□□□ 0.21
MTDH-202ENST00000519293 MIER1Q8N108 512 aa16.33■□□□□ 0.2
MTDH-202ENST00000519293 RTN4Q9NQC3 1192 aaKnown RBP16.33■□□□□ 0.2
MTDH-202ENST00000519293 PRR29P0C7W0 189 aa16.32■□□□□ 0.2
MTDH-202ENST00000519293 PLEKHG5O94827 1062 aa16.24■□□□□ 0.19
MTDH-202ENST00000519293 KLHL34Q8N239 644 aa16.22■□□□□ 0.19
MTDH-202ENST00000519293 CREBZFQ9NS37 354 aa16.21■□□□□ 0.19
MTDH-202ENST00000519293 ZBTB47Q9UFB7 747 aaPredicted RBP16.18■□□□□ 0.18
MTDH-202ENST00000519293 SPOCK2Q92563 424 aa16.16■□□□□ 0.18
MTDH-202ENST00000519293 CHRDL2Q6WN34 429 aa16.14■□□□□ 0.17
MTDH-202ENST00000519293 MNX1P50219 401 aaPredicted RBP16.09■□□□□ 0.17
MTDH-202ENST00000519293 FXR2P51116 673 aaKnown RBP eCLIP16.07■□□□□ 0.165e-10■□□□□ 10.8
MTDH-202ENST00000519293 CHADLQ6NUI6 762 aa16.03■□□□□ 0.16
MTDH-202ENST00000519293 PRKAR2AP13861 404 aaKnown RBP15.99■□□□□ 0.15
MTDH-202ENST00000519293 PIP4P2Q8N4L2 257 aa15.99■□□□□ 0.15
MTDH-202ENST00000519293 NUBP1P53384 320 aa15.96■□□□□ 0.15
MTDH-202ENST00000519293 PKD2Q13563 968 aa15.96■□□□□ 0.15
MTDH-202ENST00000519293 FARP1Q9Y4F1 1045 aaPredicted RBP15.92■□□□□ 0.14
MTDH-202ENST00000519293 NPM1P06748 294 aaKnown RBP eCLIP15.91■□□□□ 0.14
MTDH-202ENST00000519293 RASEFQ8IZ41 740 aa15.85■□□□□ 0.13
MTDH-202ENST00000519293 CIZ1Q9ULV3 898 aaPredicted RBP15.84■□□□□ 0.13
MTDH-202ENST00000519293 FAM212AQ96EL1 285 aa15.82■□□□□ 0.12
MTDH-202ENST00000519293 GSE1Q14687 1217 aa15.81■□□□□ 0.12
MTDH-202ENST00000519293 ECM2O94769 699 aaPredicted RBP15.78■□□□□ 0.12
MTDH-202ENST00000519293 DCAF8Q5TAQ9 597 aa15.75■□□□□ 0.11
MTDH-202ENST00000519293 TRIM41Q8WV44 630 aa15.75■□□□□ 0.11
MTDH-202ENST00000519293 RGL2O15211 777 aa15.65■□□□□ 0.1
MTDH-202ENST00000519293 TSPYL2Q9H2G4 693 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms