Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TNFSF4P23510 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
TNFSF4P23510 AC007541.1-201ENST00000570282 1469 ntBASIC13.36□□□□□ -0.27
TNFSF4P23510 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TNFSF4P23510 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TNFSF4P23510 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TNFSF4P23510 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TNFSF4P23510 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.36□□□□□ -0.27
TNFSF4P23510 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TNFSF4P23510 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TNFSF4P23510 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TNFSF4P23510 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TNFSF4P23510 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.36□□□□□ -0.27
TNFSF4P23510 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.36□□□□□ -0.27
TNFSF4P23510 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.36□□□□□ -0.27
TNFSF4P23510 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TNFSF4P23510 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TNFSF4P23510 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TNFSF4P23510 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TNFSF4P23510 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TNFSF4P23510 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TNFSF4P23510 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TNFSF4P23510 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TNFSF4P23510 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TNFSF4P23510 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.36□□□□□ -0.27
TNFSF4P23510 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TNFSF4P23510 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.36□□□□□ -0.27
TNFSF4P23510 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.36□□□□□ -0.27
TNFSF4P23510 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.36□□□□□ -0.27
TNFSF4P23510 AL353779.1-201ENST00000434793 351 ntBASIC13.36□□□□□ -0.27
TNFSF4P23510 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.36□□□□□ -0.27
TNFSF4P23510 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TNFSF4P23510 KRT18P43-201ENST00000469825 1281 ntBASIC13.36□□□□□ -0.27
TNFSF4P23510 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.36□□□□□ -0.27
TNFSF4P23510 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TNFSF4P23510 RRP7BP-205ENST00000566851 833 ntBASIC13.36□□□□□ -0.27
TNFSF4P23510 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.36□□□□□ -0.27
TNFSF4P23510 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.36□□□□□ -0.27
TNFSF4P23510 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.36□□□□□ -0.27
TNFSF4P23510 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.36□□□□□ -0.27
TNFSF4P23510 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TNFSF4P23510 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.36□□□□□ -0.27
TNFSF4P23510 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TNFSF4P23510 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TNFSF4P23510 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TNFSF4P23510 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.36□□□□□ -0.27
TNFSF4P23510 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.36□□□□□ -0.27
TNFSF4P23510 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TNFSF4P23510 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TNFSF4P23510 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.36□□□□□ -0.27
TNFSF4P23510 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TNFSF4P23510 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TNFSF4P23510 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TNFSF4P23510 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TNFSF4P23510 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TNFSF4P23510 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TNFSF4P23510 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TNFSF4P23510 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TNFSF4P23510 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TNFSF4P23510 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TNFSF4P23510 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TNFSF4P23510 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
TNFSF4P23510 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TNFSF4P23510 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TNFSF4P23510 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TNFSF4P23510 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
TNFSF4P23510 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TNFSF4P23510 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
TNFSF4P23510 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TNFSF4P23510 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TNFSF4P23510 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TNFSF4P23510 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TNFSF4P23510 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TNFSF4P23510 TOMM22P5-201ENST00000416399 439 ntBASIC13.35□□□□□ -0.27
TNFSF4P23510 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.35□□□□□ -0.27
TNFSF4P23510 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
TNFSF4P23510 SPTLC1P1-201ENST00000447199 261 ntBASIC13.35□□□□□ -0.27
TNFSF4P23510 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.35□□□□□ -0.27
TNFSF4P23510 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.35□□□□□ -0.27
TNFSF4P23510 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.35□□□□□ -0.27
TNFSF4P23510 AL132655.2-201ENST00000596276 594 ntBASIC13.35□□□□□ -0.27
TNFSF4P23510 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.35□□□□□ -0.27
TNFSF4P23510 AF228730.6-201ENST00000641497 218 ntBASIC13.35□□□□□ -0.27
TNFSF4P23510 AC084121.3-201ENST00000641716 218 ntBASIC13.35□□□□□ -0.27
TNFSF4P23510 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TNFSF4P23510 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.35□□□□□ -0.27
TNFSF4P23510 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TNFSF4P23510 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
TNFSF4P23510 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.35□□□□□ -0.27
TNFSF4P23510 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TNFSF4P23510 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
TNFSF4P23510 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TNFSF4P23510 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TNFSF4P23510 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TNFSF4P23510 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TNFSF4P23510 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TNFSF4P23510 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TNFSF4P23510 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TNFSF4P23510 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TNFSF4P23510 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms