Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
RAB4AP20338 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RAB4AP20338 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
RAB4AP20338 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC12.02□□□□□ -0.48
RAB4AP20338 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
RAB4AP20338 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.02□□□□□ -0.48
RAB4AP20338 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RAB4AP20338 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RAB4AP20338 MAPK10-262ENST00000641051 5738 ntBASIC12.02□□□□□ -0.48
RAB4AP20338 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB4AP20338 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RAB4AP20338 PMPCAP1-201ENST00000508114 1576 ntBASIC12.02□□□□□ -0.49
RAB4AP20338 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC12.02□□□□□ -0.49
RAB4AP20338 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB4AP20338 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB4AP20338 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB4AP20338 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
RAB4AP20338 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
RAB4AP20338 NABP1-203ENST00000409510 843 ntTSL 5 BASIC12.02□□□□□ -0.49
RAB4AP20338 LINC00982-205ENST00000420957 435 ntBASIC12.02□□□□□ -0.49
RAB4AP20338 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC12.02□□□□□ -0.49
RAB4AP20338 KRT18P38-201ENST00000449496 1282 ntBASIC12.02□□□□□ -0.49
RAB4AP20338 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RAB4AP20338 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB4AP20338 AC010203.1-204ENST00000548782 407 ntBASIC12.02□□□□□ -0.49
RAB4AP20338 DUT-205ENST00000558813 769 ntTSL 2 BASIC12.02□□□□□ -0.49
RAB4AP20338 MIR4497-201ENST00000583208 89 ntBASIC12.02□□□□□ -0.49
RAB4AP20338 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC12.02□□□□□ -0.49
RAB4AP20338 AC139887.4-201ENST00000607877 719 ntBASIC12.02□□□□□ -0.49
RAB4AP20338 IGHV3-41-201ENST00000613121 348 ntBASIC12.02□□□□□ -0.49
RAB4AP20338 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RAB4AP20338 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB4AP20338 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB4AP20338 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RAB4AP20338 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB4AP20338 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC12.02□□□□□ -0.49
RAB4AP20338 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB4AP20338 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB4AP20338 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB4AP20338 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RAB4AP20338 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RAB4AP20338 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
RAB4AP20338 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB4AP20338 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RAB4AP20338 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
RAB4AP20338 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.02□□□□□ -0.49
RAB4AP20338 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB4AP20338 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
RAB4AP20338 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB4AP20338 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB4AP20338 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.02□□□□□ -0.49
RAB4AP20338 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB4AP20338 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB4AP20338 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC12.02□□□□□ -0.49
RAB4AP20338 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB4AP20338 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB4AP20338 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.02□□□□□ -0.49
RAB4AP20338 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB4AP20338 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
RAB4AP20338 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RAB4AP20338 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RAB4AP20338 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.01□□□□□ -0.49
RAB4AP20338 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.01□□□□□ -0.49
RAB4AP20338 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC12.01□□□□□ -0.49
RAB4AP20338 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.01□□□□□ -0.49
RAB4AP20338 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RAB4AP20338 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RAB4AP20338 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RAB4AP20338 AC092919.2-201ENST00000623631 1645 ntBASIC12.01□□□□□ -0.49
RAB4AP20338 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.01□□□□□ -0.49
RAB4AP20338 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RAB4AP20338 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.01□□□□□ -0.49
RAB4AP20338 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.01□□□□□ -0.49
RAB4AP20338 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC12.01□□□□□ -0.49
RAB4AP20338 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RAB4AP20338 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
RAB4AP20338 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RAB4AP20338 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
RAB4AP20338 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC12.01□□□□□ -0.49
RAB4AP20338 AC148477.4-201ENST00000613430 1793 ntBASIC12.01□□□□□ -0.49
RAB4AP20338 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RAB4AP20338 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RAB4AP20338 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RAB4AP20338 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC12.01□□□□□ -0.49
RAB4AP20338 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RAB4AP20338 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC12.01□□□□□ -0.49
RAB4AP20338 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.01□□□□□ -0.49
RAB4AP20338 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RAB4AP20338 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC12.01□□□□□ -0.49
RAB4AP20338 AC090616.6-201ENST00000582640 721 ntBASIC12.01□□□□□ -0.49
RAB4AP20338 AC010654.1-201ENST00000615722 808 ntBASIC12.01□□□□□ -0.49
RAB4AP20338 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC12.01□□□□□ -0.49
RAB4AP20338 HYMAI.1-201ENST00000620949 238 ntBASIC12.01□□□□□ -0.49
RAB4AP20338 AL590326.2-201ENST00000625139 305 ntBASIC12.01□□□□□ -0.49
RAB4AP20338 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RAB4AP20338 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RAB4AP20338 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RAB4AP20338 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.01□□□□□ -0.49
RAB4AP20338 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC12.01□□□□□ -0.49
RAB4AP20338 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms