Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
KRT4P19013 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
KRT4P19013 AC015656.1-201ENST00000624209 3578 ntBASIC15.67■□□□□ 0.1
KRT4P19013 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
KRT4P19013 LINC01230-201ENST00000625222 3017 ntBASIC15.67■□□□□ 0.1
KRT4P19013 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.67■□□□□ 0.1
KRT4P19013 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
KRT4P19013 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KRT4P19013 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
KRT4P19013 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT4P19013 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT4P19013 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT4P19013 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.66■□□□□ 0.1
KRT4P19013 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT4P19013 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.66■□□□□ 0.1
KRT4P19013 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT4P19013 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT4P19013 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT4P19013 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT4P19013 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
KRT4P19013 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT4P19013 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT4P19013 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT4P19013 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT4P19013 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT4P19013 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT4P19013 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.66■□□□□ 0.1
KRT4P19013 RNA5SP419-201ENST00000515908 135 ntBASIC15.66■□□□□ 0.1
KRT4P19013 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.66■□□□□ 0.1
KRT4P19013 PDPK2P-202ENST00000562415 1191 ntBASIC15.66■□□□□ 0.1
KRT4P19013 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
KRT4P19013 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.66■□□□□ 0.1
KRT4P19013 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.66■□□□□ 0.1
KRT4P19013 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT4P19013 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.66■□□□□ 0.1
KRT4P19013 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT4P19013 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT4P19013 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.66■□□□□ 0.1
KRT4P19013 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
KRT4P19013 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
KRT4P19013 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
KRT4P19013 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KRT4P19013 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.65■□□□□ 0.1
KRT4P19013 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KRT4P19013 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KRT4P19013 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
KRT4P19013 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KRT4P19013 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KRT4P19013 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KRT4P19013 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
KRT4P19013 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KRT4P19013 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
KRT4P19013 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.65■□□□□ 0.1
KRT4P19013 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.65■□□□□ 0.1
KRT4P19013 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.65■□□□□ 0.1
KRT4P19013 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KRT4P19013 AP001005.1-201ENST00000571755 1248 ntBASIC15.65■□□□□ 0.1
KRT4P19013 RN7SL510P-201ENST00000581311 263 ntBASIC15.65■□□□□ 0.1
KRT4P19013 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
KRT4P19013 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
KRT4P19013 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.65■□□□□ 0.1
KRT4P19013 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KRT4P19013 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
KRT4P19013 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KRT4P19013 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.65■□□□□ 0.1
KRT4P19013 AC084364.1-201ENST00000551967 1556 ntBASIC15.65■□□□□ 0.1
KRT4P19013 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KRT4P19013 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
KRT4P19013 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
KRT4P19013 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KRT4P19013 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KRT4P19013 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KRT4P19013 AKAP8P1-201ENST00000434743 1349 ntBASIC15.65■□□□□ 0.1
KRT4P19013 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
KRT4P19013 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
KRT4P19013 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
KRT4P19013 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KRT4P19013 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KRT4P19013 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
KRT4P19013 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
KRT4P19013 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
KRT4P19013 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
KRT4P19013 REXO1L2P-201ENST00000425429 2069 ntBASIC15.64■□□□□ 0.09
KRT4P19013 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.64■□□□□ 0.09
KRT4P19013 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
KRT4P19013 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
KRT4P19013 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
KRT4P19013 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.64■□□□□ 0.09
KRT4P19013 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
KRT4P19013 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
KRT4P19013 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.64■□□□□ 0.09
KRT4P19013 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.64■□□□□ 0.09
KRT4P19013 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
KRT4P19013 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.64■□□□□ 0.09
KRT4P19013 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.64■□□□□ 0.09
KRT4P19013 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
KRT4P19013 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
KRT4P19013 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.64■□□□□ 0.09
KRT4P19013 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
KRT4P19013 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms