Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 RNA5SP423-201ENST00000517127 109 ntBASIC17.23■□□□□ 0.35
ATP2A2P16615 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.23■□□□□ 0.35
ATP2A2P16615 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.23■□□□□ 0.35
ATP2A2P16615 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.23■□□□□ 0.35
ATP2A2P16615 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.23■□□□□ 0.35
ATP2A2P16615 DUX4L45-201ENST00000566406 1057 ntBASIC17.23■□□□□ 0.35
ATP2A2P16615 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A2P16615 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A2P16615 AC244669.2-201ENST00000612320 853 ntBASIC17.23■□□□□ 0.35
ATP2A2P16615 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A2P16615 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A2P16615 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A2P16615 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A2P16615 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.23■□□□□ 0.35
ATP2A2P16615 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.23■□□□□ 0.35
ATP2A2P16615 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A2P16615 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A2P16615 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A2P16615 AC006538.1-201ENST00000567905 1585 ntBASIC17.23■□□□□ 0.35
ATP2A2P16615 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ATP2A2P16615 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A2P16615 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A2P16615 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
ATP2A2P16615 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A2P16615 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.22■□□□□ 0.35
ATP2A2P16615 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
ATP2A2P16615 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A2P16615 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A2P16615 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
ATP2A2P16615 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A2P16615 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A2P16615 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A2P16615 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.22■□□□□ 0.35
ATP2A2P16615 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A2P16615 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
ATP2A2P16615 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A2P16615 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A2P16615 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A2P16615 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.22■□□□□ 0.35
ATP2A2P16615 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.22■□□□□ 0.35
ATP2A2P16615 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A2P16615 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A2P16615 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.22■□□□□ 0.35
ATP2A2P16615 SLC25A24P2-201ENST00000415059 510 ntBASIC17.22■□□□□ 0.35
ATP2A2P16615 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
ATP2A2P16615 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.22■□□□□ 0.35
ATP2A2P16615 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.22■□□□□ 0.35
ATP2A2P16615 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A2P16615 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC17.22■□□□□ 0.35
ATP2A2P16615 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A2P16615 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.22■□□□□ 0.35
ATP2A2P16615 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.22■□□□□ 0.35
ATP2A2P16615 AC120045.2-201ENST00000567334 178 ntBASIC17.22■□□□□ 0.35
ATP2A2P16615 CLUHP6-201ENST00000580789 941 ntBASIC17.22■□□□□ 0.35
ATP2A2P16615 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.22■□□□□ 0.35
ATP2A2P16615 AL022328.3-201ENST00000607943 679 ntBASIC17.22■□□□□ 0.35
ATP2A2P16615 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A2P16615 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC17.22■□□□□ 0.35
ATP2A2P16615 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.22■□□□□ 0.35
ATP2A2P16615 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.22■□□□□ 0.35
ATP2A2P16615 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A2P16615 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A2P16615 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A2P16615 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A2P16615 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A2P16615 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
ATP2A2P16615 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2A2P16615 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.21■□□□□ 0.35
ATP2A2P16615 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.21■□□□□ 0.35
ATP2A2P16615 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A2P16615 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
ATP2A2P16615 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.21■□□□□ 0.35
ATP2A2P16615 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.21■□□□□ 0.35
ATP2A2P16615 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.21■□□□□ 0.35
ATP2A2P16615 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
ATP2A2P16615 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
ATP2A2P16615 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A2P16615 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.21■□□□□ 0.35
ATP2A2P16615 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A2P16615 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A2P16615 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.21■□□□□ 0.35
ATP2A2P16615 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A2P16615 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
ATP2A2P16615 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A2P16615 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A2P16615 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A2P16615 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.21■□□□□ 0.35
ATP2A2P16615 AC106760.1-201ENST00000508690 800 ntBASIC17.21■□□□□ 0.35
ATP2A2P16615 AP001258.2-201ENST00000529891 490 ntBASIC17.21■□□□□ 0.35
ATP2A2P16615 KRT90P-201ENST00000549264 1064 ntBASIC17.21■□□□□ 0.35
ATP2A2P16615 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.21■□□□□ 0.35
ATP2A2P16615 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
ATP2A2P16615 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.21■□□□□ 0.35
ATP2A2P16615 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC17.21■□□□□ 0.35
ATP2A2P16615 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC17.21■□□□□ 0.35
ATP2A2P16615 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.21■□□□□ 0.35
ATP2A2P16615 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.21■□□□□ 0.35
ATP2A2P16615 AC008687.7-202ENST00000637404 953 ntBASIC17.21■□□□□ 0.35
ATP2A2P16615 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A2P16615 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms