Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CFTRP13569 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
CFTRP13569 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CFTRP13569 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CFTRP13569 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CFTRP13569 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CFTRP13569 AL583805.1-201ENST00000391389 531 ntBASIC25.82■■□□□ 1.72
CFTRP13569 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CFTRP13569 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC25.82■■□□□ 1.72
CFTRP13569 AL627422.1-201ENST00000434104 580 ntBASIC25.82■■□□□ 1.72
CFTRP13569 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
CFTRP13569 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC25.82■■□□□ 1.72
CFTRP13569 MIR3188-201ENST00000583494 85 ntBASIC25.82■■□□□ 1.72
CFTRP13569 RPS15-202ENST00000585665 467 ntTSL 3 BASIC25.82■■□□□ 1.72
CFTRP13569 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CFTRP13569 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CFTRP13569 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CFTRP13569 AC009090.5-201ENST00000624886 2285 ntBASIC25.82■■□□□ 1.72
CFTRP13569 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
CFTRP13569 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC25.81■■□□□ 1.72
CFTRP13569 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
CFTRP13569 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CFTRP13569 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC25.81■■□□□ 1.72
CFTRP13569 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CFTRP13569 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CFTRP13569 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CFTRP13569 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
CFTRP13569 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
CFTRP13569 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CFTRP13569 SKA2-202ENST00000437036 625 ntTSL 2 BASIC25.81■■□□□ 1.72
CFTRP13569 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC25.81■■□□□ 1.72
CFTRP13569 CICP12-201ENST00000455801 843 ntBASIC25.81■■□□□ 1.72
CFTRP13569 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CFTRP13569 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
CFTRP13569 AC005041.3-201ENST00000606287 649 ntBASIC25.81■■□□□ 1.72
CFTRP13569 MIR6769A-201ENST00000617340 73 ntBASIC25.81■■□□□ 1.72
CFTRP13569 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CFTRP13569 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
CFTRP13569 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
CFTRP13569 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CFTRP13569 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CFTRP13569 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC25.81■■□□□ 1.72
CFTRP13569 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CFTRP13569 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
CFTRP13569 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CFTRP13569 AC015909.3-201ENST00000572855 1794 ntBASIC25.81■■□□□ 1.72
CFTRP13569 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CFTRP13569 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CFTRP13569 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC25.8■■□□□ 1.72
CFTRP13569 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC25.8■■□□□ 1.72
CFTRP13569 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC25.8■■□□□ 1.72
CFTRP13569 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CFTRP13569 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC25.8■■□□□ 1.72
CFTRP13569 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC25.8■■□□□ 1.72
CFTRP13569 XBP1P1-201ENST00000436573 652 ntBASIC25.8■■□□□ 1.72
CFTRP13569 DUTP3-201ENST00000450025 415 ntBASIC25.8■■□□□ 1.72
CFTRP13569 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CFTRP13569 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CFTRP13569 RN7SL81P-201ENST00000493781 261 ntBASIC25.8■■□□□ 1.72
CFTRP13569 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC25.8■■□□□ 1.72
CFTRP13569 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC25.8■■□□□ 1.72
CFTRP13569 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC25.8■■□□□ 1.72
CFTRP13569 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC25.8■■□□□ 1.72
CFTRP13569 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
CFTRP13569 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CFTRP13569 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
CFTRP13569 AC090502.4-201ENST00000551714 1386 ntBASIC25.8■■□□□ 1.72
CFTRP13569 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
CFTRP13569 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CFTRP13569 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
CFTRP13569 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
CFTRP13569 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC25.8■■□□□ 1.72
CFTRP13569 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC25.8■■□□□ 1.72
CFTRP13569 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
CFTRP13569 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CFTRP13569 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
CFTRP13569 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CFTRP13569 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
CFTRP13569 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC25.79■■□□□ 1.72
CFTRP13569 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC25.79■■□□□ 1.72
CFTRP13569 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC25.79■■□□□ 1.72
CFTRP13569 LINC01783-202ENST00000614408 828 ntBASIC25.79■■□□□ 1.72
CFTRP13569 BX284668.2-205ENST00000619677 828 ntBASIC25.79■■□□□ 1.72
CFTRP13569 AC133540.1-201ENST00000620845 1019 ntBASIC25.79■■□□□ 1.72
CFTRP13569 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC25.79■■□□□ 1.72
CFTRP13569 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
CFTRP13569 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CFTRP13569 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC25.79■■□□□ 1.72
CFTRP13569 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CFTRP13569 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
CFTRP13569 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
CFTRP13569 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CFTRP13569 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
CFTRP13569 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
CFTRP13569 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CFTRP13569 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CFTRP13569 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC25.79■■□□□ 1.72
CFTRP13569 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CFTRP13569 IDS-203ENST00000428056 1213 ntTSL 2 BASIC25.79■■□□□ 1.72
CFTRP13569 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms