Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UBL4AP11441 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
UBL4AP11441 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
UBL4AP11441 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UBL4AP11441 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.47□□□□□ -0.09
UBL4AP11441 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
UBL4AP11441 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UBL4AP11441 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
UBL4AP11441 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
UBL4AP11441 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
UBL4AP11441 AC090616.6-203ENST00000579186 1945 ntBASIC14.47□□□□□ -0.09
UBL4AP11441 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
UBL4AP11441 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBL4AP11441 SSR4P1-203ENST00000599569 2260 ntBASIC14.46□□□□□ -0.09
UBL4AP11441 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBL4AP11441 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
UBL4AP11441 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.46□□□□□ -0.09
UBL4AP11441 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.46□□□□□ -0.09
UBL4AP11441 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBL4AP11441 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBL4AP11441 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBL4AP11441 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBL4AP11441 AC136621.1-201ENST00000624017 2304 ntBASIC14.46□□□□□ -0.09
UBL4AP11441 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.46□□□□□ -0.09
UBL4AP11441 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
UBL4AP11441 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBL4AP11441 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBL4AP11441 MIR943-201ENST00000401286 94 ntBASIC14.46□□□□□ -0.09
UBL4AP11441 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.46□□□□□ -0.09
UBL4AP11441 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.46□□□□□ -0.09
UBL4AP11441 TREML5P-201ENST00000421694 576 ntBASIC14.46□□□□□ -0.09
UBL4AP11441 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.46□□□□□ -0.09
UBL4AP11441 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.46□□□□□ -0.09
UBL4AP11441 TARDBPP1-201ENST00000442013 1203 ntBASIC14.46□□□□□ -0.09
UBL4AP11441 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
UBL4AP11441 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.46□□□□□ -0.09
UBL4AP11441 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.46□□□□□ -0.09
UBL4AP11441 IGHV3-42-201ENST00000520410 361 ntBASIC14.46□□□□□ -0.09
UBL4AP11441 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.46□□□□□ -0.09
UBL4AP11441 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBL4AP11441 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.46□□□□□ -0.09
UBL4AP11441 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.46□□□□□ -0.09
UBL4AP11441 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.46□□□□□ -0.09
UBL4AP11441 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.46□□□□□ -0.09
UBL4AP11441 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.46□□□□□ -0.09
UBL4AP11441 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.46□□□□□ -0.09
UBL4AP11441 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.46□□□□□ -0.09
UBL4AP11441 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.46□□□□□ -0.09
UBL4AP11441 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBL4AP11441 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBL4AP11441 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
UBL4AP11441 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
UBL4AP11441 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.46□□□□□ -0.09
UBL4AP11441 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
UBL4AP11441 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBL4AP11441 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.46□□□□□ -0.1
UBL4AP11441 AC022532.1-201ENST00000624563 1728 ntBASIC14.46□□□□□ -0.1
UBL4AP11441 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.46□□□□□ -0.1
UBL4AP11441 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
UBL4AP11441 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
UBL4AP11441 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
UBL4AP11441 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
UBL4AP11441 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
UBL4AP11441 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.46□□□□□ -0.1
UBL4AP11441 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
UBL4AP11441 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBL4AP11441 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
UBL4AP11441 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBL4AP11441 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.45□□□□□ -0.1
UBL4AP11441 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBL4AP11441 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UBL4AP11441 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBL4AP11441 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBL4AP11441 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.45□□□□□ -0.1
UBL4AP11441 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBL4AP11441 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UBL4AP11441 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.45□□□□□ -0.1
UBL4AP11441 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBL4AP11441 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.45□□□□□ -0.1
UBL4AP11441 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.45□□□□□ -0.1
UBL4AP11441 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UBL4AP11441 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
UBL4AP11441 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBL4AP11441 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBL4AP11441 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBL4AP11441 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBL4AP11441 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.45□□□□□ -0.1
UBL4AP11441 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UBL4AP11441 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.45□□□□□ -0.1
UBL4AP11441 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.45□□□□□ -0.1
UBL4AP11441 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.45□□□□□ -0.1
UBL4AP11441 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.45□□□□□ -0.1
UBL4AP11441 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UBL4AP11441 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.45□□□□□ -0.1
UBL4AP11441 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.45□□□□□ -0.1
UBL4AP11441 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.45□□□□□ -0.1
UBL4AP11441 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBL4AP11441 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.45□□□□□ -0.1
UBL4AP11441 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.45□□□□□ -0.1
UBL4AP11441 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms