Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TOP1P11387 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TOP1P11387 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TOP1P11387 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
TOP1P11387 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.26■□□□□ 0.51
TOP1P11387 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.26■□□□□ 0.51
TOP1P11387 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
TOP1P11387 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TOP1P11387 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TOP1P11387 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TOP1P11387 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TOP1P11387 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TOP1P11387 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
TOP1P11387 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.26■□□□□ 0.51
TOP1P11387 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TOP1P11387 VDAC1P7-201ENST00000462417 847 ntBASIC18.26■□□□□ 0.51
TOP1P11387 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TOP1P11387 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.26■□□□□ 0.51
TOP1P11387 AL359711.2-201ENST00000563105 872 ntBASIC18.26■□□□□ 0.51
TOP1P11387 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.26■□□□□ 0.51
TOP1P11387 UBL5-208ENST00000593087 320 ntTSL 3 BASIC18.26■□□□□ 0.51
TOP1P11387 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TOP1P11387 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TOP1P11387 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18.26■□□□□ 0.51
TOP1P11387 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC18.26■□□□□ 0.51
TOP1P11387 INTS4P2-202ENST00000614726 2019 ntBASIC18.26■□□□□ 0.51
TOP1P11387 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TOP1P11387 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.26■□□□□ 0.51
TOP1P11387 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.26■□□□□ 0.51
TOP1P11387 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
TOP1P11387 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC18.26■□□□□ 0.51
TOP1P11387 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TOP1P11387 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TOP1P11387 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
TOP1P11387 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
TOP1P11387 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TOP1P11387 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TOP1P11387 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TOP1P11387 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TOP1P11387 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TOP1P11387 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC18.25■□□□□ 0.51
TOP1P11387 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TOP1P11387 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.25■□□□□ 0.51
TOP1P11387 PRAL-201ENST00000624952 3286 ntBASIC18.25■□□□□ 0.51
TOP1P11387 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.25■□□□□ 0.51
TOP1P11387 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TOP1P11387 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TOP1P11387 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TOP1P11387 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.25■□□□□ 0.51
TOP1P11387 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TOP1P11387 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.25■□□□□ 0.51
TOP1P11387 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.25■□□□□ 0.51
TOP1P11387 GIMAP3P-201ENST00000495150 836 ntBASIC18.25■□□□□ 0.51
TOP1P11387 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.25■□□□□ 0.51
TOP1P11387 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.25■□□□□ 0.51
TOP1P11387 AC124283.3-201ENST00000570869 594 ntBASIC18.25■□□□□ 0.51
TOP1P11387 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.25■□□□□ 0.51
TOP1P11387 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.25■□□□□ 0.51
TOP1P11387 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC18.25■□□□□ 0.51
TOP1P11387 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.25■□□□□ 0.51
TOP1P11387 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TOP1P11387 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.25■□□□□ 0.51
TOP1P11387 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TOP1P11387 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TOP1P11387 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TOP1P11387 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TOP1P11387 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TOP1P11387 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TOP1P11387 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.25■□□□□ 0.51
TOP1P11387 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TOP1P11387 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TOP1P11387 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TOP1P11387 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
TOP1P11387 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
TOP1P11387 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TOP1P11387 AC073347.1-201ENST00000421633 2643 ntBASIC18.24■□□□□ 0.51
TOP1P11387 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TOP1P11387 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TOP1P11387 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TOP1P11387 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TOP1P11387 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TOP1P11387 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TOP1P11387 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.24■□□□□ 0.51
TOP1P11387 AC127383.1-201ENST00000444697 1800 ntBASIC18.24■□□□□ 0.51
TOP1P11387 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TOP1P11387 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
TOP1P11387 AC092850.2-201ENST00000623821 2697 ntBASIC18.24■□□□□ 0.51
TOP1P11387 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TOP1P11387 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TOP1P11387 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TOP1P11387 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TOP1P11387 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TOP1P11387 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.24■□□□□ 0.51
TOP1P11387 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.24■□□□□ 0.51
TOP1P11387 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.24■□□□□ 0.51
TOP1P11387 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.24■□□□□ 0.51
TOP1P11387 AC120045.2-201ENST00000567334 178 ntBASIC18.24■□□□□ 0.51
TOP1P11387 TBCB-211ENST00000589996 724 ntTSL 3 BASIC18.24■□□□□ 0.51
TOP1P11387 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.24■□□□□ 0.51
TOP1P11387 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms