Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC172P0C7W6 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CCDC172P0C7W6 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC172P0C7W6 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC172P0C7W6 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CCDC172P0C7W6 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
CCDC172P0C7W6 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC172P0C7W6 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC172P0C7W6 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC172P0C7W6 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CCDC172P0C7W6 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC172P0C7W6 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC172P0C7W6 SPDYE7P-202ENST00000420373 878 ntBASIC16.9■□□□□ 0.3
CCDC172P0C7W6 FAM58DP-201ENST00000428076 619 ntBASIC16.9■□□□□ 0.3
CCDC172P0C7W6 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC172P0C7W6 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC172P0C7W6 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC172P0C7W6 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC172P0C7W6 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC172P0C7W6 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC172P0C7W6 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC172P0C7W6 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC172P0C7W6 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC172P0C7W6 RN7SL828P-201ENST00000607615 303 ntBASIC16.9■□□□□ 0.3
CCDC172P0C7W6 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC172P0C7W6 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC172P0C7W6 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC172P0C7W6 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CCDC172P0C7W6 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC172P0C7W6 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC172P0C7W6 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC172P0C7W6 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC172P0C7W6 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CCDC172P0C7W6 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC172P0C7W6 AC005252.3-201ENST00000623855 2258 ntBASIC16.9■□□□□ 0.3
CCDC172P0C7W6 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC172P0C7W6 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC172P0C7W6 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC172P0C7W6 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC172P0C7W6 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC172P0C7W6 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC172P0C7W6 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC172P0C7W6 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC172P0C7W6 KRT8P12-202ENST00000472924 1397 ntBASIC16.89■□□□□ 0.3
CCDC172P0C7W6 AC148477.4-201ENST00000613430 1793 ntBASIC16.89■□□□□ 0.3
CCDC172P0C7W6 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.89■□□□□ 0.3
CCDC172P0C7W6 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC172P0C7W6 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC172P0C7W6 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC172P0C7W6 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC172P0C7W6 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CCDC172P0C7W6 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC172P0C7W6 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC172P0C7W6 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CCDC172P0C7W6 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC172P0C7W6 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC172P0C7W6 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC172P0C7W6 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CCDC172P0C7W6 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CCDC172P0C7W6 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC172P0C7W6 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC172P0C7W6 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC172P0C7W6 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC172P0C7W6 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC172P0C7W6 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC172P0C7W6 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC172P0C7W6 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.89■□□□□ 0.29
CCDC172P0C7W6 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.89■□□□□ 0.29
CCDC172P0C7W6 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC172P0C7W6 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.89■□□□□ 0.29
CCDC172P0C7W6 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC172P0C7W6 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.89■□□□□ 0.29
CCDC172P0C7W6 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC172P0C7W6 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC172P0C7W6 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC172P0C7W6 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC172P0C7W6 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC172P0C7W6 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CCDC172P0C7W6 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC172P0C7W6 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC172P0C7W6 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC172P0C7W6 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC172P0C7W6 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC172P0C7W6 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC172P0C7W6 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
CCDC172P0C7W6 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC172P0C7W6 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC172P0C7W6 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms