Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CTSBP07858 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CTSBP07858 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
CTSBP07858 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CTSBP07858 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CTSBP07858 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.64□□□□□ -0.07
CTSBP07858 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CTSBP07858 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CTSBP07858 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CTSBP07858 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.64□□□□□ -0.07
CTSBP07858 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CTSBP07858 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.64□□□□□ -0.07
CTSBP07858 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.64□□□□□ -0.07
CTSBP07858 AL158070.2-201ENST00000623713 1621 ntBASIC14.64□□□□□ -0.07
CTSBP07858 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CTSBP07858 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CTSBP07858 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CTSBP07858 ACKR1-201ENST00000368121 1240 ntBASIC14.64□□□□□ -0.07
CTSBP07858 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.64□□□□□ -0.07
CTSBP07858 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.64□□□□□ -0.07
CTSBP07858 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CTSBP07858 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.64□□□□□ -0.07
CTSBP07858 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CTSBP07858 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.64□□□□□ -0.07
CTSBP07858 BNIP3P42-201ENST00000454982 569 ntBASIC14.64□□□□□ -0.07
CTSBP07858 AC007551.1-201ENST00000457394 519 ntBASIC14.64□□□□□ -0.07
CTSBP07858 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.64□□□□□ -0.07
CTSBP07858 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.64□□□□□ -0.07
CTSBP07858 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.64□□□□□ -0.07
CTSBP07858 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.64□□□□□ -0.07
CTSBP07858 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.64□□□□□ -0.07
CTSBP07858 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.64□□□□□ -0.07
CTSBP07858 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.64□□□□□ -0.07
CTSBP07858 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.64□□□□□ -0.07
CTSBP07858 BNIP3P29-201ENST00000598302 571 ntBASIC14.64□□□□□ -0.07
CTSBP07858 MIR6805-201ENST00000615055 62 ntBASIC14.64□□□□□ -0.07
CTSBP07858 AC011447.5-201ENST00000616168 564 ntBASIC14.64□□□□□ -0.07
CTSBP07858 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CTSBP07858 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.64□□□□□ -0.07
CTSBP07858 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CTSBP07858 AC105917.1-201ENST00000506637 2539 ntBASIC14.64□□□□□ -0.07
CTSBP07858 C18orf15-201ENST00000623680 2534 ntBASIC14.64□□□□□ -0.07
CTSBP07858 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.64□□□□□ -0.07
CTSBP07858 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CTSBP07858 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CTSBP07858 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CTSBP07858 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.64□□□□□ -0.07
CTSBP07858 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CTSBP07858 AC087481.3-201ENST00000602886 1894 ntBASIC14.63□□□□□ -0.07
CTSBP07858 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CTSBP07858 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CTSBP07858 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CTSBP07858 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CTSBP07858 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CTSBP07858 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CTSBP07858 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CTSBP07858 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CTSBP07858 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CTSBP07858 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CTSBP07858 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CTSBP07858 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.63□□□□□ -0.07
CTSBP07858 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.63□□□□□ -0.07
CTSBP07858 KLF2P2-201ENST00000416807 1039 ntBASIC14.63□□□□□ -0.07
CTSBP07858 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.63□□□□□ -0.07
CTSBP07858 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.63□□□□□ -0.07
CTSBP07858 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.63□□□□□ -0.07
CTSBP07858 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.63□□□□□ -0.07
CTSBP07858 AL355864.2-201ENST00000447420 863 ntBASIC14.63□□□□□ -0.07
CTSBP07858 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CTSBP07858 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.63□□□□□ -0.07
CTSBP07858 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CTSBP07858 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.63□□□□□ -0.07
CTSBP07858 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CTSBP07858 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CTSBP07858 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.63□□□□□ -0.07
CTSBP07858 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.63□□□□□ -0.07
CTSBP07858 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.63□□□□□ -0.07
CTSBP07858 AC145423.3-201ENST00000615987 467 ntBASIC14.63□□□□□ -0.07
CTSBP07858 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CTSBP07858 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.63□□□□□ -0.07
CTSBP07858 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.63□□□□□ -0.07
CTSBP07858 COX11-210ENST00000639671 696 ntBASIC14.63□□□□□ -0.07
CTSBP07858 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.63□□□□□ -0.07
CTSBP07858 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CTSBP07858 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CTSBP07858 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CTSBP07858 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CTSBP07858 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
CTSBP07858 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CTSBP07858 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.63□□□□□ -0.07
CTSBP07858 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.63□□□□□ -0.07
CTSBP07858 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CTSBP07858 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CTSBP07858 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CTSBP07858 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CTSBP07858 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CTSBP07858 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CTSBP07858 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CTSBP07858 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.62□□□□□ -0.07
CTSBP07858 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms