Protein–RNA interactions for Protein: O95447

LCA5L, Lebercilin-like protein, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5LO95447 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LCA5LO95447 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LCA5LO95447 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LCA5LO95447 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LCA5LO95447 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LCA5LO95447 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LCA5LO95447 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.5■□□□□ 0.23
LCA5LO95447 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LCA5LO95447 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
LCA5LO95447 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LCA5LO95447 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LCA5LO95447 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LCA5LO95447 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LCA5LO95447 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LCA5LO95447 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LCA5LO95447 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LCA5LO95447 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LCA5LO95447 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LCA5LO95447 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LCA5LO95447 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LCA5LO95447 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LCA5LO95447 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.49■□□□□ 0.23
LCA5LO95447 TOMM22P5-201ENST00000416399 439 ntBASIC16.49■□□□□ 0.23
LCA5LO95447 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.49■□□□□ 0.23
LCA5LO95447 AL080243.2-201ENST00000418783 582 ntBASIC16.49■□□□□ 0.23
LCA5LO95447 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.49■□□□□ 0.23
LCA5LO95447 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.49■□□□□ 0.23
LCA5LO95447 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LCA5LO95447 YBX1P5-201ENST00000509441 847 ntBASIC16.49■□□□□ 0.23
LCA5LO95447 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.49■□□□□ 0.23
LCA5LO95447 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LCA5LO95447 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.49■□□□□ 0.23
LCA5LO95447 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.49■□□□□ 0.23
LCA5LO95447 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LCA5LO95447 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LCA5LO95447 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
LCA5LO95447 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LCA5LO95447 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LCA5LO95447 AC097359.2-201ENST00000604992 2389 ntBASIC16.49■□□□□ 0.23
LCA5LO95447 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LCA5LO95447 AP001267.2-201ENST00000532619 2086 ntBASIC16.49■□□□□ 0.23
LCA5LO95447 TKT-201ENST00000296289 1931 ntTSL 5 BASIC16.49■□□□□ 0.23
LCA5LO95447 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LCA5LO95447 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC16.48■□□□□ 0.23
LCA5LO95447 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LCA5LO95447 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LCA5LO95447 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
LCA5LO95447 AC007787.1-201ENST00000588095 1583 ntBASIC16.48■□□□□ 0.23
LCA5LO95447 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LCA5LO95447 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.48■□□□□ 0.23
LCA5LO95447 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
LCA5LO95447 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
LCA5LO95447 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LCA5LO95447 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LCA5LO95447 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LCA5LO95447 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
LCA5LO95447 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LCA5LO95447 AC015922.1-201ENST00000421102 1152 ntBASIC16.48■□□□□ 0.23
LCA5LO95447 RBPMS2P1-201ENST00000437762 623 ntBASIC16.48■□□□□ 0.23
LCA5LO95447 CEND1P1-201ENST00000451006 455 ntBASIC16.48■□□□□ 0.23
LCA5LO95447 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.48■□□□□ 0.23
LCA5LO95447 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC16.48■□□□□ 0.23
LCA5LO95447 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LCA5LO95447 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.48■□□□□ 0.23
LCA5LO95447 MIR6069-201ENST00000620069 79 ntBASIC16.48■□□□□ 0.23
LCA5LO95447 AC139530.3-201ENST00000620344 690 ntBASIC16.48■□□□□ 0.23
LCA5LO95447 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LCA5LO95447 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LCA5LO95447 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LCA5LO95447 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LCA5LO95447 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LCA5LO95447 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.48■□□□□ 0.23
LCA5LO95447 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LCA5LO95447 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LCA5LO95447 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
LCA5LO95447 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LCA5LO95447 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LCA5LO95447 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LCA5LO95447 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LCA5LO95447 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LCA5LO95447 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.48■□□□□ 0.23
LCA5LO95447 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LCA5LO95447 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
LCA5LO95447 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LCA5LO95447 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.47■□□□□ 0.23
LCA5LO95447 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC16.47■□□□□ 0.23
LCA5LO95447 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
LCA5LO95447 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LCA5LO95447 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC16.47■□□□□ 0.23
LCA5LO95447 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.47■□□□□ 0.23
LCA5LO95447 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LCA5LO95447 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LCA5LO95447 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
LCA5LO95447 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.47■□□□□ 0.23
LCA5LO95447 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LCA5LO95447 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.47■□□□□ 0.23
LCA5LO95447 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LCA5LO95447 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LCA5LO95447 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LCA5LO95447 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms