Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH4O75427 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LRCH4O75427 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH4O75427 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH4O75427 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
LRCH4O75427 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH4O75427 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH4O75427 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.16■□□□□ 0.18
LRCH4O75427 AC104457.1-201ENST00000401024 814 ntBASIC16.16■□□□□ 0.18
LRCH4O75427 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.16■□□□□ 0.18
LRCH4O75427 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.16■□□□□ 0.18
LRCH4O75427 AC093214.1-201ENST00000511688 1107 ntBASIC16.16■□□□□ 0.18
LRCH4O75427 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.16■□□□□ 0.18
LRCH4O75427 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH4O75427 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH4O75427 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.16■□□□□ 0.18
LRCH4O75427 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH4O75427 AC104794.3-201ENST00000566840 1248 ntBASIC16.16■□□□□ 0.18
LRCH4O75427 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.16■□□□□ 0.18
LRCH4O75427 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH4O75427 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH4O75427 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH4O75427 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH4O75427 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH4O75427 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
LRCH4O75427 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH4O75427 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH4O75427 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
LRCH4O75427 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH4O75427 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH4O75427 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH4O75427 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.16■□□□□ 0.18
LRCH4O75427 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH4O75427 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.16■□□□□ 0.18
LRCH4O75427 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
LRCH4O75427 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LRCH4O75427 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LRCH4O75427 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH4O75427 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH4O75427 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH4O75427 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.15■□□□□ 0.18
LRCH4O75427 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH4O75427 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.15■□□□□ 0.18
LRCH4O75427 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH4O75427 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.15■□□□□ 0.18
LRCH4O75427 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
LRCH4O75427 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH4O75427 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.15■□□□□ 0.18
LRCH4O75427 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LRCH4O75427 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.15■□□□□ 0.18
LRCH4O75427 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.15■□□□□ 0.18
LRCH4O75427 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH4O75427 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
LRCH4O75427 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LRCH4O75427 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH4O75427 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.15■□□□□ 0.18
LRCH4O75427 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH4O75427 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH4O75427 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH4O75427 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH4O75427 BASP1P1-201ENST00000430708 665 ntBASIC16.15■□□□□ 0.18
LRCH4O75427 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.15■□□□□ 0.18
LRCH4O75427 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH4O75427 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.15■□□□□ 0.18
LRCH4O75427 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.15■□□□□ 0.18
LRCH4O75427 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.15■□□□□ 0.18
LRCH4O75427 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH4O75427 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.15■□□□□ 0.18
LRCH4O75427 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.15■□□□□ 0.18
LRCH4O75427 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.15■□□□□ 0.18
LRCH4O75427 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH4O75427 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH4O75427 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LRCH4O75427 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.15■□□□□ 0.18
LRCH4O75427 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH4O75427 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LRCH4O75427 CLK3P2-201ENST00000427566 1453 ntBASIC16.15■□□□□ 0.18
LRCH4O75427 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH4O75427 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH4O75427 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LRCH4O75427 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.15■□□□□ 0.18
LRCH4O75427 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH4O75427 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
LRCH4O75427 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.14■□□□□ 0.17
LRCH4O75427 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH4O75427 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH4O75427 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.14■□□□□ 0.17
LRCH4O75427 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
LRCH4O75427 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH4O75427 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH4O75427 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH4O75427 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.14■□□□□ 0.17
LRCH4O75427 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH4O75427 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH4O75427 REXO1L4P-201ENST00000605109 1937 ntBASIC16.14■□□□□ 0.17
LRCH4O75427 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
LRCH4O75427 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH4O75427 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH4O75427 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH4O75427 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms