Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
PDCD6O75340 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PDCD6O75340 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
PDCD6O75340 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PDCD6O75340 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PDCD6O75340 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PDCD6O75340 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.18□□□□□ -0.3
PDCD6O75340 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
PDCD6O75340 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PDCD6O75340 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PDCD6O75340 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.17□□□□□ -0.3
PDCD6O75340 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PDCD6O75340 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PDCD6O75340 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PDCD6O75340 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
PDCD6O75340 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PDCD6O75340 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.17□□□□□ -0.3
PDCD6O75340 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PDCD6O75340 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PDCD6O75340 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PDCD6O75340 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PDCD6O75340 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PDCD6O75340 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.17□□□□□ -0.3
PDCD6O75340 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PDCD6O75340 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PDCD6O75340 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PDCD6O75340 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PDCD6O75340 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
PDCD6O75340 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PDCD6O75340 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.17□□□□□ -0.3
PDCD6O75340 CEND1P1-201ENST00000451006 455 ntBASIC13.17□□□□□ -0.3
PDCD6O75340 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PDCD6O75340 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC13.17□□□□□ -0.3
PDCD6O75340 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.17□□□□□ -0.3
PDCD6O75340 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.17□□□□□ -0.3
PDCD6O75340 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.17□□□□□ -0.3
PDCD6O75340 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.17□□□□□ -0.3
PDCD6O75340 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.17□□□□□ -0.3
PDCD6O75340 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.17□□□□□ -0.3
PDCD6O75340 AC003101.2-201ENST00000612557 442 ntBASIC13.17□□□□□ -0.3
PDCD6O75340 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PDCD6O75340 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PDCD6O75340 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PDCD6O75340 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PDCD6O75340 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
PDCD6O75340 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.17□□□□□ -0.3
PDCD6O75340 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
PDCD6O75340 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PDCD6O75340 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PDCD6O75340 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.17□□□□□ -0.3
PDCD6O75340 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
PDCD6O75340 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PDCD6O75340 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.17□□□□□ -0.3
PDCD6O75340 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.17□□□□□ -0.3
PDCD6O75340 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PDCD6O75340 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
PDCD6O75340 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PDCD6O75340 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
PDCD6O75340 CICP11-201ENST00000434745 2827 ntBASIC13.17□□□□□ -0.3
PDCD6O75340 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PDCD6O75340 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PDCD6O75340 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
PDCD6O75340 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PDCD6O75340 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PDCD6O75340 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PDCD6O75340 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PDCD6O75340 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PDCD6O75340 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.16□□□□□ -0.3
PDCD6O75340 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
PDCD6O75340 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PDCD6O75340 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PDCD6O75340 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PDCD6O75340 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PDCD6O75340 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PDCD6O75340 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PDCD6O75340 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
PDCD6O75340 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.16□□□□□ -0.3
PDCD6O75340 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
PDCD6O75340 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.16□□□□□ -0.3
PDCD6O75340 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
PDCD6O75340 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.16□□□□□ -0.3
PDCD6O75340 SBF1P1-201ENST00000444527 5631 ntBASIC13.16□□□□□ -0.3
PDCD6O75340 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
PDCD6O75340 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PDCD6O75340 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PDCD6O75340 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PDCD6O75340 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
PDCD6O75340 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
PDCD6O75340 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.16□□□□□ -0.3
PDCD6O75340 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.16□□□□□ -0.3
PDCD6O75340 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.16□□□□□ -0.3
PDCD6O75340 TARDBPP1-201ENST00000442013 1203 ntBASIC13.16□□□□□ -0.3
PDCD6O75340 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PDCD6O75340 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.16□□□□□ -0.3
PDCD6O75340 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.16□□□□□ -0.3
PDCD6O75340 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.16□□□□□ -0.3
PDCD6O75340 POLD2P1-201ENST00000511220 997 ntBASIC13.16□□□□□ -0.3
PDCD6O75340 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.16□□□□□ -0.3
PDCD6O75340 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.16□□□□□ -0.3
PDCD6O75340 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms