Protein–RNA interactions for Protein: O60869

EDF1, Endothelial differentiation-related factor 1, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1O60869 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
EDF1O60869 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.33■□□□□ 0.04
EDF1O60869 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EDF1O60869 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EDF1O60869 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
EDF1O60869 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EDF1O60869 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.32■□□□□ 0.04
EDF1O60869 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.32■□□□□ 0.04
EDF1O60869 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
EDF1O60869 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EDF1O60869 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.32■□□□□ 0.04
EDF1O60869 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
EDF1O60869 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
EDF1O60869 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.32■□□□□ 0.04
EDF1O60869 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
EDF1O60869 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EDF1O60869 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
EDF1O60869 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
EDF1O60869 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.32■□□□□ 0.04
EDF1O60869 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.32■□□□□ 0.04
EDF1O60869 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EDF1O60869 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
EDF1O60869 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EDF1O60869 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EDF1O60869 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EDF1O60869 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EDF1O60869 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EDF1O60869 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.32■□□□□ 0.04
EDF1O60869 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.32■□□□□ 0.04
EDF1O60869 KRT18P21-201ENST00000515767 1272 ntBASIC15.32■□□□□ 0.04
EDF1O60869 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EDF1O60869 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.32■□□□□ 0.04
EDF1O60869 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.32■□□□□ 0.04
EDF1O60869 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.32■□□□□ 0.04
EDF1O60869 AC023141.13-201ENST00000604991 943 ntBASIC15.32■□□□□ 0.04
EDF1O60869 AL161645.1-201ENST00000622716 1255 ntBASIC15.32■□□□□ 0.04
EDF1O60869 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.32■□□□□ 0.04
EDF1O60869 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.32■□□□□ 0.04
EDF1O60869 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.32■□□□□ 0.04
EDF1O60869 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.32■□□□□ 0.04
EDF1O60869 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.32■□□□□ 0.04
EDF1O60869 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EDF1O60869 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EDF1O60869 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
EDF1O60869 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EDF1O60869 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EDF1O60869 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
EDF1O60869 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
EDF1O60869 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
EDF1O60869 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.32■□□□□ 0.04
EDF1O60869 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.32■□□□□ 0.04
EDF1O60869 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
EDF1O60869 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EDF1O60869 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EDF1O60869 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
EDF1O60869 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
EDF1O60869 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EDF1O60869 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.31■□□□□ 0.04
EDF1O60869 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC15.31■□□□□ 0.04
EDF1O60869 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
EDF1O60869 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.31■□□□□ 0.04
EDF1O60869 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EDF1O60869 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.31■□□□□ 0.04
EDF1O60869 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.31■□□□□ 0.04
EDF1O60869 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EDF1O60869 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
EDF1O60869 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.31■□□□□ 0.04
EDF1O60869 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.31■□□□□ 0.04
EDF1O60869 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.31■□□□□ 0.04
EDF1O60869 AC105233.2-201ENST00000523697 349 ntBASIC15.31■□□□□ 0.04
EDF1O60869 AF228730.5-201ENST00000530288 346 ntBASIC15.31■□□□□ 0.04
EDF1O60869 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.31■□□□□ 0.04
EDF1O60869 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.31■□□□□ 0.04
EDF1O60869 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
EDF1O60869 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.31■□□□□ 0.04
EDF1O60869 AC007064.4-201ENST00000637740 555 ntBASIC15.31■□□□□ 0.04
EDF1O60869 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.31■□□□□ 0.04
EDF1O60869 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
EDF1O60869 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
EDF1O60869 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.31■□□□□ 0.04
EDF1O60869 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EDF1O60869 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.31■□□□□ 0.04
EDF1O60869 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
EDF1O60869 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EDF1O60869 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
EDF1O60869 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
EDF1O60869 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
EDF1O60869 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
EDF1O60869 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
EDF1O60869 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC15.31■□□□□ 0.04
EDF1O60869 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
EDF1O60869 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
EDF1O60869 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
EDF1O60869 CICP17-201ENST00000418553 2377 ntBASIC15.31■□□□□ 0.04
EDF1O60869 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EDF1O60869 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
EDF1O60869 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.3■□□□□ 0.04
EDF1O60869 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EDF1O60869 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
EDF1O60869 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms