Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
PRAMEF11O60813 AL033527.5-201ENST00000641382 801 ntBASIC15.71■□□□□ 0.11
PRAMEF11O60813 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEF11O60813 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
PRAMEF11O60813 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEF11O60813 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEF11O60813 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEF11O60813 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
PRAMEF11O60813 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PRAMEF11O60813 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PRAMEF11O60813 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.71■□□□□ 0.1
PRAMEF11O60813 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.71■□□□□ 0.1
PRAMEF11O60813 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
PRAMEF11O60813 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEF11O60813 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEF11O60813 AC093525.8-201ENST00000624099 1342 ntBASIC15.7■□□□□ 0.1
PRAMEF11O60813 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.7■□□□□ 0.1
PRAMEF11O60813 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEF11O60813 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
PRAMEF11O60813 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
PRAMEF11O60813 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEF11O60813 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEF11O60813 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.7■□□□□ 0.1
PRAMEF11O60813 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.7■□□□□ 0.1
PRAMEF11O60813 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.7■□□□□ 0.1
PRAMEF11O60813 CU634019.7-201ENST00000624153 1185 ntBASIC15.7■□□□□ 0.1
PRAMEF11O60813 FP236241.2-201ENST00000624906 1185 ntBASIC15.7■□□□□ 0.1
PRAMEF11O60813 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
PRAMEF11O60813 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEF11O60813 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
PRAMEF11O60813 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
PRAMEF11O60813 AC006486.2-201ENST00000624246 2199 ntBASIC15.7■□□□□ 0.1
PRAMEF11O60813 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEF11O60813 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEF11O60813 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.7■□□□□ 0.1
PRAMEF11O60813 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEF11O60813 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEF11O60813 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEF11O60813 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEF11O60813 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.7■□□□□ 0.1
PRAMEF11O60813 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEF11O60813 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.7■□□□□ 0.1
PRAMEF11O60813 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEF11O60813 AC007787.1-201ENST00000588095 1583 ntBASIC15.7■□□□□ 0.1
PRAMEF11O60813 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEF11O60813 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEF11O60813 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
PRAMEF11O60813 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF11O60813 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF11O60813 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.69■□□□□ 0.1
PRAMEF11O60813 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF11O60813 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.69■□□□□ 0.1
PRAMEF11O60813 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF11O60813 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF11O60813 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.69■□□□□ 0.1
PRAMEF11O60813 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.69■□□□□ 0.1
PRAMEF11O60813 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF11O60813 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.69■□□□□ 0.1
PRAMEF11O60813 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.69■□□□□ 0.1
PRAMEF11O60813 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF11O60813 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF11O60813 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF11O60813 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF11O60813 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
PRAMEF11O60813 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF11O60813 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.69■□□□□ 0.1
PRAMEF11O60813 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.69■□□□□ 0.1
PRAMEF11O60813 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PRAMEF11O60813 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.69■□□□□ 0.1
PRAMEF11O60813 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.69■□□□□ 0.1
PRAMEF11O60813 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.69■□□□□ 0.1
PRAMEF11O60813 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.69■□□□□ 0.1
PRAMEF11O60813 RN7SL752P-201ENST00000463779 287 ntBASIC15.69■□□□□ 0.1
PRAMEF11O60813 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.69■□□□□ 0.1
PRAMEF11O60813 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.69■□□□□ 0.1
PRAMEF11O60813 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.69■□□□□ 0.1
PRAMEF11O60813 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.69■□□□□ 0.1
PRAMEF11O60813 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.69■□□□□ 0.1
PRAMEF11O60813 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.69■□□□□ 0.1
PRAMEF11O60813 AC005252.2-201ENST00000624630 1141 ntBASIC15.69■□□□□ 0.1
PRAMEF11O60813 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF11O60813 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.69■□□□□ 0.1
PRAMEF11O60813 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF11O60813 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PRAMEF11O60813 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PRAMEF11O60813 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.69■□□□□ 0.1
PRAMEF11O60813 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF11O60813 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF11O60813 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF11O60813 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF11O60813 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF11O60813 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PRAMEF11O60813 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF11O60813 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
PRAMEF11O60813 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF11O60813 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.68■□□□□ 0.1
PRAMEF11O60813 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF11O60813 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF11O60813 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.68■□□□□ 0.1
PRAMEF11O60813 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 815.4 ms