Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RIPK2O43353 AC015656.1-201ENST00000624209 3578 ntBASIC15.82■□□□□ 0.12
RIPK2O43353 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RIPK2O43353 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
RIPK2O43353 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RIPK2O43353 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.82■□□□□ 0.12
RIPK2O43353 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RIPK2O43353 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RIPK2O43353 AC093909.1-201ENST00000504731 1122 ntBASIC15.82■□□□□ 0.12
RIPK2O43353 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.82■□□□□ 0.12
RIPK2O43353 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.82■□□□□ 0.12
RIPK2O43353 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RIPK2O43353 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.82■□□□□ 0.12
RIPK2O43353 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.82■□□□□ 0.12
RIPK2O43353 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RIPK2O43353 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.82■□□□□ 0.12
RIPK2O43353 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
RIPK2O43353 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.82■□□□□ 0.12
RIPK2O43353 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RIPK2O43353 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
RIPK2O43353 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RIPK2O43353 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RIPK2O43353 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RIPK2O43353 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RIPK2O43353 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RIPK2O43353 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RIPK2O43353 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RIPK2O43353 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.82■□□□□ 0.12
RIPK2O43353 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RIPK2O43353 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RIPK2O43353 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.81■□□□□ 0.12
RIPK2O43353 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RIPK2O43353 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RIPK2O43353 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.81■□□□□ 0.12
RIPK2O43353 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RIPK2O43353 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.81■□□□□ 0.12
RIPK2O43353 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RIPK2O43353 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RIPK2O43353 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RIPK2O43353 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RIPK2O43353 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RIPK2O43353 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
RIPK2O43353 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.81■□□□□ 0.12
RIPK2O43353 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RIPK2O43353 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RIPK2O43353 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RIPK2O43353 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.81■□□□□ 0.12
RIPK2O43353 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RIPK2O43353 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.81■□□□□ 0.12
RIPK2O43353 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.81■□□□□ 0.12
RIPK2O43353 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.81■□□□□ 0.12
RIPK2O43353 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.81■□□□□ 0.12
RIPK2O43353 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RIPK2O43353 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
RIPK2O43353 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RIPK2O43353 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.81■□□□□ 0.12
RIPK2O43353 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.81■□□□□ 0.12
RIPK2O43353 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.81■□□□□ 0.12
RIPK2O43353 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.81■□□□□ 0.12
RIPK2O43353 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
RIPK2O43353 AC104692.2-201ENST00000603054 253 ntBASIC15.81■□□□□ 0.12
RIPK2O43353 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
RIPK2O43353 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RIPK2O43353 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.81■□□□□ 0.12
RIPK2O43353 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
RIPK2O43353 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
RIPK2O43353 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RIPK2O43353 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RIPK2O43353 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RIPK2O43353 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RIPK2O43353 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RIPK2O43353 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RIPK2O43353 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RIPK2O43353 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RIPK2O43353 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.8■□□□□ 0.12
RIPK2O43353 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.8■□□□□ 0.12
RIPK2O43353 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.8■□□□□ 0.12
RIPK2O43353 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RIPK2O43353 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RIPK2O43353 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RIPK2O43353 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RIPK2O43353 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RIPK2O43353 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RIPK2O43353 MIR346-201ENST00000362234 95 ntBASIC15.8■□□□□ 0.12
RIPK2O43353 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.8■□□□□ 0.12
RIPK2O43353 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RIPK2O43353 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RIPK2O43353 TFAMP1-201ENST00000412727 736 ntBASIC15.8■□□□□ 0.12
RIPK2O43353 AL355306.1-201ENST00000415580 579 ntBASIC15.8■□□□□ 0.12
RIPK2O43353 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.8■□□□□ 0.12
RIPK2O43353 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.8■□□□□ 0.12
RIPK2O43353 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.8■□□□□ 0.12
RIPK2O43353 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.8■□□□□ 0.12
RIPK2O43353 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.8■□□□□ 0.12
RIPK2O43353 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.8■□□□□ 0.12
RIPK2O43353 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RIPK2O43353 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RIPK2O43353 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RIPK2O43353 AL513190.1-201ENST00000621254 727 ntBASIC15.8■□□□□ 0.12
RIPK2O43353 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms