Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
PAX4O43316 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
PAX4O43316 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
PAX4O43316 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.62
PAX4O43316 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
PAX4O43316 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
PAX4O43316 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
PAX4O43316 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC11.21□□□□□ -0.62
PAX4O43316 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
PAX4O43316 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
PAX4O43316 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
PAX4O43316 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
PAX4O43316 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
PAX4O43316 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC11.21□□□□□ -0.62
PAX4O43316 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
PAX4O43316 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
PAX4O43316 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC11.21□□□□□ -0.62
PAX4O43316 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
PAX4O43316 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC11.2□□□□□ -0.62
PAX4O43316 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
PAX4O43316 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
PAX4O43316 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC11.2□□□□□ -0.62
PAX4O43316 IMPDH1P4-201ENST00000445028 1534 ntBASIC11.2□□□□□ -0.62
PAX4O43316 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
PAX4O43316 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
PAX4O43316 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
PAX4O43316 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC11.2□□□□□ -0.62
PAX4O43316 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
PAX4O43316 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
PAX4O43316 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
PAX4O43316 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
PAX4O43316 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
PAX4O43316 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC11.2□□□□□ -0.62
PAX4O43316 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
PAX4O43316 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
PAX4O43316 KRT8P12-202ENST00000472924 1397 ntBASIC11.2□□□□□ -0.62
PAX4O43316 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
PAX4O43316 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
PAX4O43316 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
PAX4O43316 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
PAX4O43316 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
PAX4O43316 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
PAX4O43316 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC11.2□□□□□ -0.62
PAX4O43316 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
PAX4O43316 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
PAX4O43316 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
PAX4O43316 PNMT-202ENST00000394246 821 ntTSL 2 BASIC11.2□□□□□ -0.62
PAX4O43316 FO393414.2-201ENST00000405153 598 ntBASIC11.2□□□□□ -0.62
PAX4O43316 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
PAX4O43316 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC11.2□□□□□ -0.62
PAX4O43316 SEC63P1-201ENST00000425785 1258 ntBASIC11.2□□□□□ -0.62
PAX4O43316 AL645939.2-201ENST00000427340 991 ntBASIC11.2□□□□□ -0.62
PAX4O43316 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC11.2□□□□□ -0.62
PAX4O43316 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC11.2□□□□□ -0.62
PAX4O43316 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC11.2□□□□□ -0.62
PAX4O43316 SATB1-217ENST00000493952 626 ntTSL 3 BASIC11.2□□□□□ -0.62
PAX4O43316 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
PAX4O43316 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC11.2□□□□□ -0.62
PAX4O43316 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC11.2□□□□□ -0.62
PAX4O43316 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC11.2□□□□□ -0.62
PAX4O43316 IGHV3-42-201ENST00000520410 361 ntBASIC11.2□□□□□ -0.62
PAX4O43316 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC11.2□□□□□ -0.62
PAX4O43316 EHF-205ENST00000527935 557 ntTSL 2 BASIC11.2□□□□□ -0.62
PAX4O43316 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC11.2□□□□□ -0.62
PAX4O43316 AC140878.1-201ENST00000565277 250 ntBASIC11.2□□□□□ -0.62
PAX4O43316 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC11.2□□□□□ -0.62
PAX4O43316 AC073592.8-201ENST00000624126 511 ntBASIC11.2□□□□□ -0.62
PAX4O43316 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
PAX4O43316 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC11.2□□□□□ -0.62
PAX4O43316 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
PAX4O43316 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC11.2□□□□□ -0.62
PAX4O43316 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
PAX4O43316 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
PAX4O43316 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
PAX4O43316 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
PAX4O43316 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
PAX4O43316 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
PAX4O43316 AL731571.1-201ENST00000617058 5428 ntBASIC11.2□□□□□ -0.62
PAX4O43316 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
PAX4O43316 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
PAX4O43316 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
PAX4O43316 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
PAX4O43316 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
PAX4O43316 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
PAX4O43316 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
PAX4O43316 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
PAX4O43316 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
PAX4O43316 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC11.19□□□□□ -0.62
PAX4O43316 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
PAX4O43316 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
PAX4O43316 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC11.19□□□□□ -0.62
PAX4O43316 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
PAX4O43316 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
PAX4O43316 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
PAX4O43316 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC11.19□□□□□ -0.62
PAX4O43316 AC092850.2-201ENST00000623821 2697 ntBASIC11.19□□□□□ -0.62
PAX4O43316 LRRFIP1P1-201ENST00000498774 2246 ntBASIC11.19□□□□□ -0.62
PAX4O43316 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
PAX4O43316 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
PAX4O43316 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms