Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.53■□□□□ 0.08
MID1O15344 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MID1O15344 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
MID1O15344 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MID1O15344 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MID1O15344 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MID1O15344 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.53■□□□□ 0.08
MID1O15344 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MID1O15344 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.53■□□□□ 0.08
MID1O15344 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MID1O15344 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
MID1O15344 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MID1O15344 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
MID1O15344 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MID1O15344 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MID1O15344 FAM21FP-201ENST00000426241 1131 ntBASIC15.53■□□□□ 0.08
MID1O15344 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.53■□□□□ 0.08
MID1O15344 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.53■□□□□ 0.08
MID1O15344 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MID1O15344 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.53■□□□□ 0.08
MID1O15344 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.53■□□□□ 0.08
MID1O15344 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.53■□□□□ 0.08
MID1O15344 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.53■□□□□ 0.08
MID1O15344 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
MID1O15344 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.53■□□□□ 0.08
MID1O15344 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MID1O15344 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.53■□□□□ 0.08
MID1O15344 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.53■□□□□ 0.08
MID1O15344 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MID1O15344 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
MID1O15344 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.53■□□□□ 0.08
MID1O15344 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
MID1O15344 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MID1O15344 AC022188.1-201ENST00000620960 1664 ntBASIC15.53■□□□□ 0.08
MID1O15344 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
MID1O15344 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MID1O15344 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
MID1O15344 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
MID1O15344 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MID1O15344 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MID1O15344 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MID1O15344 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MID1O15344 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MID1O15344 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MID1O15344 AC092127.1-201ENST00000567093 3455 ntBASIC15.52■□□□□ 0.08
MID1O15344 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.52■□□□□ 0.08
MID1O15344 AC127383.1-201ENST00000444697 1800 ntBASIC15.52■□□□□ 0.08
MID1O15344 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.52■□□□□ 0.08
MID1O15344 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
MID1O15344 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MID1O15344 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.52■□□□□ 0.08
MID1O15344 PRAL-201ENST00000624952 3286 ntBASIC15.52■□□□□ 0.08
MID1O15344 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MID1O15344 KRT8P35-201ENST00000483942 1338 ntBASIC15.52■□□□□ 0.08
MID1O15344 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
MID1O15344 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
MID1O15344 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.52■□□□□ 0.08
MID1O15344 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
MID1O15344 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.52■□□□□ 0.08
MID1O15344 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MID1O15344 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MID1O15344 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.52■□□□□ 0.08
MID1O15344 AC026954.1-201ENST00000429771 1293 ntBASIC15.52■□□□□ 0.08
MID1O15344 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
MID1O15344 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.52■□□□□ 0.08
MID1O15344 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
MID1O15344 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.52■□□□□ 0.08
MID1O15344 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.52■□□□□ 0.08
MID1O15344 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.52■□□□□ 0.08
MID1O15344 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.52■□□□□ 0.08
MID1O15344 AC145423.3-201ENST00000615987 467 ntBASIC15.52■□□□□ 0.08
MID1O15344 RHOXF1P1-202ENST00000635473 501 ntBASIC15.52■□□□□ 0.08
MID1O15344 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.08
MID1O15344 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MID1O15344 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.52■□□□□ 0.07
MID1O15344 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MID1O15344 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.52■□□□□ 0.07
MID1O15344 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MID1O15344 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
MID1O15344 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MID1O15344 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
MID1O15344 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.52■□□□□ 0.07
MID1O15344 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
MID1O15344 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MID1O15344 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MID1O15344 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MID1O15344 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MID1O15344 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MID1O15344 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.51■□□□□ 0.07
MID1O15344 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MID1O15344 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
MID1O15344 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MID1O15344 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
MID1O15344 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.51■□□□□ 0.07
MID1O15344 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
MID1O15344 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MID1O15344 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.51■□□□□ 0.07
MID1O15344 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.51■□□□□ 0.07
MID1O15344 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
MID1O15344 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms