Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
O00370 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
O00370 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.59■□□□□ 0.25
O00370 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
O00370 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.59■□□□□ 0.25
O00370 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
O00370 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.59■□□□□ 0.25
O00370 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
O00370 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
O00370 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
O00370 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
O00370 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
O00370 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
O00370 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
O00370 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
O00370 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
O00370 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
O00370 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
O00370 AC236430.1-201ENST00000402231 743 ntBASIC16.59■□□□□ 0.25
O00370 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
O00370 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.59■□□□□ 0.25
O00370 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
O00370 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
O00370 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
O00370 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.59■□□□□ 0.25
O00370 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.59■□□□□ 0.25
O00370 LINC02560-201ENST00000596379 459 ntBASIC16.59■□□□□ 0.25
O00370 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.59■□□□□ 0.25
O00370 AC008761.3-201ENST00000624803 892 ntBASIC16.59■□□□□ 0.25
O00370 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
O00370 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.59■□□□□ 0.25
O00370 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
O00370 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
O00370 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.59■□□□□ 0.25
O00370 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
O00370 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.59■□□□□ 0.25
O00370 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
O00370 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
O00370 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.58■□□□□ 0.25
O00370 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
O00370 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
O00370 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
O00370 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.25
O00370 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
O00370 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
O00370 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
O00370 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
O00370 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.58■□□□□ 0.24
O00370 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
O00370 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.58■□□□□ 0.24
O00370 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
O00370 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
O00370 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.58■□□□□ 0.24
O00370 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.58■□□□□ 0.24
O00370 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.58■□□□□ 0.24
O00370 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.58■□□□□ 0.24
O00370 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.58■□□□□ 0.24
O00370 TPRX2P-201ENST00000535362 881 ntBASIC16.58■□□□□ 0.24
O00370 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.24
O00370 AC000095.1-201ENST00000603208 874 ntBASIC16.58■□□□□ 0.24
O00370 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
O00370 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
O00370 AC084364.1-201ENST00000551967 1556 ntBASIC16.58■□□□□ 0.24
O00370 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
O00370 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
O00370 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
O00370 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.58■□□□□ 0.24
O00370 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
O00370 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
O00370 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.58■□□□□ 0.24
O00370 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
O00370 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
O00370 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.57■□□□□ 0.24
O00370 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
O00370 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
O00370 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
O00370 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
O00370 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
O00370 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.57■□□□□ 0.24
O00370 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.57■□□□□ 0.24
O00370 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
O00370 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
O00370 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
O00370 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.57■□□□□ 0.24
O00370 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
O00370 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.57■□□□□ 0.24
O00370 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
O00370 CLK3P2-201ENST00000427566 1453 ntBASIC16.57■□□□□ 0.24
O00370 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.57■□□□□ 0.24
O00370 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.57■□□□□ 0.24
O00370 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
O00370 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
O00370 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
O00370 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.57■□□□□ 0.24
O00370 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.57■□□□□ 0.24
O00370 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.57■□□□□ 0.24
O00370 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.57■□□□□ 0.24
O00370 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
O00370 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.57■□□□□ 0.24
O00370 RARRES2P5-201ENST00000564013 466 ntBASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms