Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.76□□□□□ -0.05
UPK1AO00322 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1AO00322 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.76□□□□□ -0.05
UPK1AO00322 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.76□□□□□ -0.05
UPK1AO00322 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1AO00322 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1AO00322 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1AO00322 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.76□□□□□ -0.05
UPK1AO00322 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1AO00322 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
UPK1AO00322 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1AO00322 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.76□□□□□ -0.05
UPK1AO00322 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
UPK1AO00322 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1AO00322 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.76□□□□□ -0.05
UPK1AO00322 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1AO00322 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
UPK1AO00322 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1AO00322 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1AO00322 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
UPK1AO00322 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.75□□□□□ -0.05
UPK1AO00322 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.75□□□□□ -0.05
UPK1AO00322 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
UPK1AO00322 CICP14-201ENST00000629111 2732 ntBASIC14.75□□□□□ -0.05
UPK1AO00322 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1AO00322 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1AO00322 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.75□□□□□ -0.05
UPK1AO00322 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1AO00322 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1AO00322 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1AO00322 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.75□□□□□ -0.05
UPK1AO00322 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.75□□□□□ -0.05
UPK1AO00322 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.75□□□□□ -0.05
UPK1AO00322 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1AO00322 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1AO00322 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1AO00322 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.75□□□□□ -0.05
UPK1AO00322 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.75□□□□□ -0.05
UPK1AO00322 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.75□□□□□ -0.05
UPK1AO00322 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.75□□□□□ -0.05
UPK1AO00322 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.75□□□□□ -0.05
UPK1AO00322 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1AO00322 SERBP1P3-201ENST00000459980 809 ntBASIC14.75□□□□□ -0.05
UPK1AO00322 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.75□□□□□ -0.05
UPK1AO00322 AC069120.2-201ENST00000524091 540 ntBASIC14.75□□□□□ -0.05
UPK1AO00322 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.75□□□□□ -0.05
UPK1AO00322 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1AO00322 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.75□□□□□ -0.05
UPK1AO00322 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.75□□□□□ -0.05
UPK1AO00322 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.75□□□□□ -0.05
UPK1AO00322 AC140878.1-201ENST00000565277 250 ntBASIC14.75□□□□□ -0.05
UPK1AO00322 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.75□□□□□ -0.05
UPK1AO00322 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1AO00322 AC006538.3-201ENST00000612495 578 ntBASIC14.75□□□□□ -0.05
UPK1AO00322 TEX28P1-201ENST00000613479 1221 ntBASIC14.75□□□□□ -0.05
UPK1AO00322 TEX28P2-201ENST00000617764 1221 ntBASIC14.75□□□□□ -0.05
UPK1AO00322 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.75□□□□□ -0.05
UPK1AO00322 AC073592.8-201ENST00000624126 511 ntBASIC14.75□□□□□ -0.05
UPK1AO00322 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1AO00322 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1AO00322 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1AO00322 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1AO00322 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.75□□□□□ -0.05
UPK1AO00322 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1AO00322 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
UPK1AO00322 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1AO00322 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1AO00322 FER1L4-210ENST00000615531 5998 ntBASIC14.75□□□□□ -0.05
UPK1AO00322 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1AO00322 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1AO00322 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1AO00322 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1AO00322 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1AO00322 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1AO00322 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.74□□□□□ -0.05
UPK1AO00322 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UPK1AO00322 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
UPK1AO00322 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.74□□□□□ -0.05
UPK1AO00322 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UPK1AO00322 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UPK1AO00322 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UPK1AO00322 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.74□□□□□ -0.05
UPK1AO00322 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UPK1AO00322 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UPK1AO00322 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
UPK1AO00322 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
UPK1AO00322 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.74□□□□□ -0.05
UPK1AO00322 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
UPK1AO00322 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
UPK1AO00322 AC107890.1-201ENST00000422478 521 ntBASIC14.74□□□□□ -0.05
UPK1AO00322 METTL21AP1-201ENST00000438852 635 ntBASIC14.74□□□□□ -0.05
UPK1AO00322 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.74□□□□□ -0.05
UPK1AO00322 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
UPK1AO00322 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.74□□□□□ -0.05
UPK1AO00322 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.74□□□□□ -0.05
UPK1AO00322 AC067863.1-201ENST00000494933 530 ntBASIC14.74□□□□□ -0.05
UPK1AO00322 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.74□□□□□ -0.05
UPK1AO00322 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.74□□□□□ -0.05
UPK1AO00322 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
UPK1AO00322 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms