Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
AP3B1O00203 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
AP3B1O00203 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP3B1O00203 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP3B1O00203 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP3B1O00203 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP3B1O00203 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP3B1O00203 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP3B1O00203 AC074338.1-201ENST00000416825 156 ntBASIC15.75■□□□□ 0.11
AP3B1O00203 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.75■□□□□ 0.11
AP3B1O00203 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.75■□□□□ 0.11
AP3B1O00203 RPL13P2-201ENST00000440687 659 ntBASIC15.75■□□□□ 0.11
AP3B1O00203 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.75■□□□□ 0.11
AP3B1O00203 DNAJB3-202ENST00000449667 1266 ntBASIC15.75■□□□□ 0.11
AP3B1O00203 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.75■□□□□ 0.11
AP3B1O00203 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP3B1O00203 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP3B1O00203 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.75■□□□□ 0.11
AP3B1O00203 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.75■□□□□ 0.11
AP3B1O00203 AC069120.2-201ENST00000524091 540 ntBASIC15.75■□□□□ 0.11
AP3B1O00203 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.75■□□□□ 0.11
AP3B1O00203 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.75■□□□□ 0.11
AP3B1O00203 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP3B1O00203 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.75■□□□□ 0.11
AP3B1O00203 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
AP3B1O00203 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.75■□□□□ 0.11
AP3B1O00203 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP3B1O00203 AL596442.2-201ENST00000610240 980 ntBASIC15.75■□□□□ 0.11
AP3B1O00203 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP3B1O00203 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP3B1O00203 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.75■□□□□ 0.11
AP3B1O00203 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP3B1O00203 AL161772.1-201ENST00000610494 4412 ntBASIC15.75■□□□□ 0.11
AP3B1O00203 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.75■□□□□ 0.11
AP3B1O00203 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP3B1O00203 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
AP3B1O00203 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.75■□□□□ 0.11
AP3B1O00203 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.75■□□□□ 0.11
AP3B1O00203 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.75■□□□□ 0.11
AP3B1O00203 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP3B1O00203 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
AP3B1O00203 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP3B1O00203 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP3B1O00203 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP3B1O00203 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP3B1O00203 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP3B1O00203 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP3B1O00203 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP3B1O00203 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP3B1O00203 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP3B1O00203 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP3B1O00203 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP3B1O00203 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP3B1O00203 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
AP3B1O00203 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.74■□□□□ 0.11
AP3B1O00203 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.74■□□□□ 0.11
AP3B1O00203 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP3B1O00203 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
AP3B1O00203 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP3B1O00203 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP3B1O00203 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.74■□□□□ 0.11
AP3B1O00203 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP3B1O00203 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
AP3B1O00203 FAM8A3P-201ENST00000427218 844 ntBASIC15.74■□□□□ 0.11
AP3B1O00203 KLF2P3-201ENST00000451977 1087 ntBASIC15.74■□□□□ 0.11
AP3B1O00203 AC125807.1-201ENST00000483097 614 ntBASIC15.74■□□□□ 0.11
AP3B1O00203 ZNF890P-202ENST00000530367 1156 ntBASIC15.74■□□□□ 0.11
AP3B1O00203 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.74■□□□□ 0.11
AP3B1O00203 AC140878.1-201ENST00000565277 250 ntBASIC15.74■□□□□ 0.11
AP3B1O00203 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.74■□□□□ 0.11
AP3B1O00203 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.74■□□□□ 0.11
AP3B1O00203 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.74■□□□□ 0.11
AP3B1O00203 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.74■□□□□ 0.11
AP3B1O00203 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP3B1O00203 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.74■□□□□ 0.11
AP3B1O00203 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP3B1O00203 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
AP3B1O00203 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
AP3B1O00203 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
AP3B1O00203 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP3B1O00203 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.74■□□□□ 0.11
AP3B1O00203 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP3B1O00203 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP3B1O00203 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
AP3B1O00203 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
AP3B1O00203 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
AP3B1O00203 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP3B1O00203 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
AP3B1O00203 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
AP3B1O00203 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
AP3B1O00203 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP3B1O00203 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
AP3B1O00203 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.73■□□□□ 0.11
AP3B1O00203 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
AP3B1O00203 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
AP3B1O00203 AC087499.5-201ENST00000452760 1342 ntBASIC15.73■□□□□ 0.11
AP3B1O00203 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
AP3B1O00203 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
AP3B1O00203 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
AP3B1O00203 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms