Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
HFM1A2PYH4 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
HFM1A2PYH4 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
HFM1A2PYH4 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
HFM1A2PYH4 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC22.63■■□□□ 1.21
HFM1A2PYH4 SNX21-203ENST00000372541 771 ntTSL 2 BASIC22.63■■□□□ 1.21
HFM1A2PYH4 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC22.63■■□□□ 1.21
HFM1A2PYH4 MESTP3-201ENST00000503460 968 ntBASIC22.63■■□□□ 1.21
HFM1A2PYH4 AL391280.1-201ENST00000506969 1062 ntBASIC22.63■■□□□ 1.21
HFM1A2PYH4 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC22.63■■□□□ 1.21
HFM1A2PYH4 HNRNPA1P48-202ENST00000565308 961 ntBASIC22.63■■□□□ 1.21
HFM1A2PYH4 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC22.63■■□□□ 1.21
HFM1A2PYH4 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC22.63■■□□□ 1.21
HFM1A2PYH4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
HFM1A2PYH4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
HFM1A2PYH4 AHCYP2-201ENST00000430630 1300 ntBASIC22.63■■□□□ 1.21
HFM1A2PYH4 ABR-203ENST00000536794 2213 ntTSL 2 BASIC22.63■■□□□ 1.21
HFM1A2PYH4 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
HFM1A2PYH4 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
HFM1A2PYH4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
HFM1A2PYH4 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
HFM1A2PYH4 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
HFM1A2PYH4 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
HFM1A2PYH4 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC22.62■■□□□ 1.21
HFM1A2PYH4 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
HFM1A2PYH4 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC22.62■■□□□ 1.21
HFM1A2PYH4 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
HFM1A2PYH4 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
HFM1A2PYH4 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
HFM1A2PYH4 FAM21FP-201ENST00000426241 1131 ntBASIC22.62■■□□□ 1.21
HFM1A2PYH4 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
HFM1A2PYH4 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC22.62■■□□□ 1.21
HFM1A2PYH4 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
HFM1A2PYH4 AC138696.2-201ENST00000607376 223 ntBASIC22.62■■□□□ 1.21
HFM1A2PYH4 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC22.62■■□□□ 1.21
HFM1A2PYH4 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
HFM1A2PYH4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
HFM1A2PYH4 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC22.62■■□□□ 1.21
HFM1A2PYH4 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
HFM1A2PYH4 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
HFM1A2PYH4 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
HFM1A2PYH4 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
HFM1A2PYH4 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
HFM1A2PYH4 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
HFM1A2PYH4 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
HFM1A2PYH4 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
HFM1A2PYH4 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC22.61■■□□□ 1.21
HFM1A2PYH4 AC132872.4-202ENST00000622924 2756 ntBASIC22.61■■□□□ 1.21
HFM1A2PYH4 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
HFM1A2PYH4 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC22.61■■□□□ 1.21
HFM1A2PYH4 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
HFM1A2PYH4 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
HFM1A2PYH4 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
HFM1A2PYH4 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
HFM1A2PYH4 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
HFM1A2PYH4 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
HFM1A2PYH4 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
HFM1A2PYH4 MIR1202-201ENST00000408529 83 ntBASIC22.61■■□□□ 1.21
HFM1A2PYH4 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
HFM1A2PYH4 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC22.61■■□□□ 1.21
HFM1A2PYH4 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC22.61■■□□□ 1.21
HFM1A2PYH4 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC22.61■■□□□ 1.21
HFM1A2PYH4 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC22.61■■□□□ 1.21
HFM1A2PYH4 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
HFM1A2PYH4 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
HFM1A2PYH4 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
HFM1A2PYH4 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
HFM1A2PYH4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
HFM1A2PYH4 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
HFM1A2PYH4 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
HFM1A2PYH4 AC092384.3-202ENST00000564646 2873 ntBASIC22.61■■□□□ 1.21
HFM1A2PYH4 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
HFM1A2PYH4 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC22.6■■□□□ 1.21
HFM1A2PYH4 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
HFM1A2PYH4 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
HFM1A2PYH4 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC22.6■■□□□ 1.21
HFM1A2PYH4 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
HFM1A2PYH4 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
HFM1A2PYH4 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC22.6■■□□□ 1.21
HFM1A2PYH4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
HFM1A2PYH4 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
HFM1A2PYH4 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
HFM1A2PYH4 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
HFM1A2PYH4 MPV17-205ENST00000402310 906 ntTSL 5 BASIC22.6■■□□□ 1.21
HFM1A2PYH4 MIR1908-201ENST00000410394 80 ntBASIC22.6■■□□□ 1.21
HFM1A2PYH4 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
HFM1A2PYH4 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC22.6■■□□□ 1.21
HFM1A2PYH4 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
HFM1A2PYH4 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
HFM1A2PYH4 RIT1-205ENST00000539040 919 ntTSL 2 BASIC22.6■■□□□ 1.21
HFM1A2PYH4 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
HFM1A2PYH4 AC006486.2-201ENST00000624246 2199 ntBASIC22.6■■□□□ 1.21
HFM1A2PYH4 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
HFM1A2PYH4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
HFM1A2PYH4 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC22.6■■□□□ 1.21
HFM1A2PYH4 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
HFM1A2PYH4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
HFM1A2PYH4 CICP6-201ENST00000457191 2729 ntBASIC22.6■■□□□ 1.21
HFM1A2PYH4 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
HFM1A2PYH4 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms